Pseudomonas monsensis: HV782_000350
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Entry
HV782_000350 CDS
T07539
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe02025
Biofilm formation - Pseudomonas aeruginosa
pmoe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HV782_000350 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HV782_000350 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmoe02044
]
HV782_000350 (tssM)
Secretion system [BR:
pmoe02044
]
Type VI secretion system
Imp/Vas secretion system core components
HV782_000350 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
7tm_7
SRC-1
Motif
Other DBs
NCBI-ProteinID:
QXI00479
LinkDB
All DBs
Position
complement(72201..75740)
Genome browser
AA seq
1179 aa
AA seq
DB search
MKKFFKKVGAFLRQTWVWTLLLVLFVALLVWFVGPLLAVDDYKFWESPTSRLLTIAVLFL
IWGLTMVFVSWRAGVRKKEVEATEDGQDRIRREELIDDEEKELKARFKDALKTLKTSSLY
RGRSERWRNELPWYLLIGPQSGGKTSLLDFSGLEFPINKIDRKLTRDTQGTRHCDWYFAD
HGVLIDTAGRYMTQGEKDVDGSAWTTLLELLRKRRRGRPLNGVLVTIPVEILTGGSEQDI
DTLARQVRGRLQEIYQKLHVDVPVYLVLSKADKLLGFDEFFDQLTREESDQVLGTSFRKD
QVGTDVAVLRGEFEELLRRLNSQVIMRMHSERDTQRRGRILDFPHQLGQIGEHLCLFVDM
AFTGNRYQRATQLRGFYLTSAPHLVQQMDETAAAIGANLGVNAGVLPTLRSGRSRFIHHL
FSQVIFPEADLAGLDKRERSRINWGQRALYVGALAALALFGMLWAGGFSANYERLENLRN
LAQNWTQQRSALSPRDDAMGALKTLDTSYAATQVFPKKGDVSYHERGGLYQGEDVNPVVK
EAYERELEKQLLPRVATLLEGQIRANMKDRDRLLNSLRAYLMLNMKDRRDAAWLKDWVAT
DWSQRYTGNTAVQNGLNAHLERLLKQPFIYPLNEQLVTQARQVLRSESLATVVYRMLREQ
ARNLPDYRFSQHLGPQGSLFIGTEYVIPGFYTQTGYQQYFSVQGSALVTDILRDNWVLGE
GAGISDMDLRRLMVELEQLYFRDYANYWSEAVGQVALPPISDAGEGAEQLAGLTSANSPV
LALLTEVRENTRFPAAADPVDEAGDAADALAGQKGKLGKVGKLAAAAADKASALNVAKTL
PDTAKKSLQRRFEPLHRLLDDNNGPAADLTPALSALNDLQLQLSGLARSSTPEQAAFEMA
KTRMSGQRDALTNLRAASGRLPRPLSVWFNVLAEDSWRLVLNDAYQYLNGRYQNELYSVY
GKTINKRYPFSASSTSDVAISDFREFFRAQGTVDRFFDSYMRPFVSGDPGNYRMRSVDGH
SLPVSKMYLDQMAAALTIRQSFFSINPAEPTVQFKLEPYTLDPAVSRSEFKFGDKTMEYR
HGPILPMSFKWPTDAEDGRTSLVMDKMAGRPIGIEKNSGPWSLFRLFDLMQTEYLTGRDV
LVLKADVGGLRANYLLTSQRTPNPFDMGVLRTFRMPVQL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttttcaagaaagtcggcgccttcctgcgccagacctgggtctggaccctg
ctgctggtgctgttcgtggcgctgctggtgtggtttgtcggcccgttgttggcggtcgat
gactacaagttctgggagagcccgacctctcgcctgttgaccatcgccgtgctgttcctg
atctggggcctgaccatggtcttcgtcagctggcgcgccggtgtacgcaagaaagaagtc
gaagccaccgaagatggccaggatcggatccgccgcgaagagctgatcgacgacgaggag
aaagagttgaaagcgcgtttcaaagacgcgctgaaaaccctgaaaacctcaagcctgtat
cgcggccgcagcgagcgctggcgcaacgaactgccgtggtatctgttgatcggcccgcag
tccggcggcaagaccagcctgctggacttctccggtctggaattcccgatcaacaagatc
gaccgcaagctgacccgcgacacccaaggcactcgtcattgcgattggtacttcgccgac
catggtgtgctgatcgacaccgccggacgttacatgacccaaggcgagaaagacgtcgac
ggcagtgcctggaccaccctgctggaactgctgcgcaagcgtcgtcgcggtcgtccgttg
aacggcgtactggtgaccatcccggtggaaatcctcaccggtggcagcgagcaagacatc
gacaccctggcgcgccaagtgcgtggtcgcctgcaagagatttatcagaagctgcacgtc
gacgtgccggtgtatctggtactgagcaaggccgacaaactgctgggcttcgacgagttc
ttcgatcagctgacccgcgaggaaagcgatcaggtgttgggtaccagtttccgcaaggac
caggttggcaccgacgtggctgtgctgcgcggcgagttcgaggaactgctgcgtcgcctc
aacagccaagtgatcatgcgcatgcactccgagcgtgacacgcagcgccgtggccgcatt
ctcgacttcccgcatcaactggggcagatcggcgagcacctgtgcctgttcgtcgacatg
gcgttcaccggcaaccgttaccagcgggccacgcaactgcgtggtttctacctgaccagc
gcaccccacctggttcagcaaatggacgagacggctgccgccatcggcgcgaatctgggt
gtgaatgccggtgtgctgccgaccctgcgcagcggtcgctcgcggttcatccaccatttg
ttcagccaggtgattttccccgaggccgatctggccggtctggacaagcgcgaacgcagc
cgcatcaactggggccaacgtgcgctgtacgtcggcgcattggcggcactggcgctgttc
ggcatgctctgggcgggcggtttttcggccaactatgagcgtctggaaaacctgcgcaat
ctggcgcagaactggacgcaacaacgctcggcgctgtccccgcgtgatgacgcgatgggc
gcgctgaaaaccctcgataccagctacgccgcgacccaggtgttcccgaaaaagggcgac
gtgtcgtaccacgagcgtggcggtctgtatcagggtgaagacgtcaatccagtggtcaaa
gaggcttacgagcgcgagcttgaaaagcaactgctgccacgggttgccaccctgctcgaa
gggcagatccgcgccaacatgaaggaccgcgaccgcctgctcaacagcctgcgcgcgtac
ctgatgctgaacatgaaggaccgtcgcgatgccgcgtggctcaaggactgggtcgccact
gactggtcgcagcgctacaccggcaacaccgcggtgcagaacggtctgaatgcgcacctg
gagcgtctgctgaagcagccgtttatctacccgctgaacgaacagttggtgacccaggcg
cgtcaggtcctgcgcagcgaatcgctggccaccgtggtgtatcgcatgctccgcgagcag
gcgcgcaacctgccggactaccgcttcagccaacacctcggcccacaaggctcgctgttt
atcggcaccgaatacgtgattccgggcttctacacgcaaaccggttatcagcagtatttc
tcggtgcagggctcggcgctggtcaccgacatcctgcgtgacaactgggtgctgggcgaa
ggtgcgggcatcagcgacatggacttgcgtcgcctgatggtcgagctggagcaactgtac
ttccgcgactacgccaactactggagcgaagccgttggccaggtggccctgccgccaatc
agcgacgccggtgaaggcgccgagcaactggcgggcctgacctcggccaactcgccggtg
ctggccttgctcactgaagtacgcgagaacacacgcttcccggccgccgccgatccggtg
gatgaagccggtgatgccgccgatgcattggcggggcagaagggcaaactgggtaaagtc
ggcaaactggccgccgccgcagcggacaaggcttcggccctgaacgtggcgaagaccctg
ccggacaccgcgaagaagtcgctgcaacgccgcttcgaaccgctgcatcgtctgctcgat
gacaacaacggcccggcggcagacctgacccctgcgctgagcgcgctcaacgacctgcag
ctgcaactgtccggtctggcccgttccagtacaccggaacaagccgcgttcgaaatggcg
aaaacccgcatgagcggccagcgtgatgcgctgaccaacctgcgtgctgcctcgggtcgc
ctgccgcgtccgctcagcgtgtggttcaacgtgctggccgaagactcgtggcgtctggtg
ctcaacgatgcctaccaatacctgaacggccgttatcagaacgagctgtacagcgtgtat
ggcaaaaccatcaacaagcgttatccgttcagcgccagcagcaccagtgacgtagcgatc
agcgatttccgcgagttcttccgggctcaaggcaccgtcgaccgcttcttcgacagctac
atgcgtccgttcgtcagtggtgatccgggcaactaccggatgcgcagcgtcgatggccac
agcctgccggtatcgaagatgtacctcgaccagatggccgccgcgctgacgattcgccag
agcttcttctcgatcaacccggccgagccgaccgtgcagttcaaactggagccgtacacc
ctcgacccggccgtgagccgttccgagttcaagttcggcgacaagaccatggagtaccgc
cacggtccgatcctgccaatgtcgttcaagtggccgaccgatgctgaagacggtcgcacc
agcctggtcatggacaagatggcggggcgtccgatcggcatcgagaagaactccggccca
tggtcgctgttccgtctgttcgacctgatgcagaccgagtacctgaccggtcgcgacgtg
ctggtgctgaaagccgacgtgggtggcctgcgcgccaactacctgctgaccagccagcgc
acgccgaatccgttcgacatgggcgtgctgcgcaccttccgtatgccggtgcagctctga
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