Pseudomonas monsensis: HV782_001040
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Entry
HV782_001040 CDS
T07539
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pmoe
Pseudomonas monsensis
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoe03032
]
HV782_001040 (gyrB)
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_001040 (gyrB)
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HV782_001040 (gyrB)
DNA replication proteins [BR:
pmoe03032
]
Prokaryotic type
DNA Topoisomerases
HV782_001040 (gyrB)
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HV782_001040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QXI00612
UniProt:
A0AAX1P505
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All DBs
Position
231056..233473
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AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ISIIIHPDESITVKDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEELVLTVRRSGKIWEQTYVHGVPQAPMAIVGDSETTGTQIHFKASSETFKN
IHFSWDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQV
FHFNIQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD
FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRKTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVSLEMLGDHAKMQDWLAQYEVRLRTVEKSGLVYKASLREDRERGV
WLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLSTLLDEGAYIQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRRDFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcaccac
atggtgttcgaggtggtcgacaactcgatcgacgaagccctcgccggccattgcgacgac
atcagcatcatcatccacccggatgagtccatcaccgttaaagacaacggccgtggcatc
ccggtagacgtgcacaaagaggaaggcgtttccgccgccgaggtcatcatgaccgtcctc
cacgccggcggtaagttcgacgacaactcctacaaggtatccggcggtctgcacggtgta
ggcgtatcggtagtgaacgccctgtccgaagagctggtactgactgttcgccgcagcggc
aagatctgggaacagacctatgtccacggcgtgcctcaggcaccgatggccatcgttggc
gacagcgaaaccaccggcacccagatccacttcaaggcttccagcgaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgcattcgtgaactgtccttcctcaactcc
ggtgtcggcatcgtcctcaaggacgaacgcagcggcaaggaagagctgttcaagtacgaa
ggcggcctgcgtgcgttcgttgaatatctgaacaccaacaagactgcggtcaaccaggtg
ttccacttcaacatccagcgtgaagacggtatcggcgtggaaatcgccctgcagtggaac
gacagcttcaacgagaacctgttgtgcttcaccaacaacattccgcagcgcgacggcggc
acccacctggtgggtttccgttcggccctgacgcgtaacctgaacaactacatcgagcag
gaaggtctggcgaagaagcacaaagtcgccaccaccggtgacgatgcccgtgaaggcctg
accgcgattatctcggtgaaggtgcctgatccgaagttcagctcgcagaccaaagacaaa
ctggtgtcttccgaagtgaagactgcggtcgagcaggagatgggcaagtacttctccgac
ttccttctggaaaacccgaacgaagccaagctggttgtcggcaagatgatcgacgcggcc
cgtgcccgtgaagcagcgcgcaaggcccgtgagatgacccgccgcaaaggtgcgctggac
atcgccggcctgccgggcaagctcgctgactgccaggaaaaagacccggcactctccgaa
ctgtacctcgtggaaggtgactccgcgggcggctctgccaagcagggacgtaaccgcaag
acccaggcgatcctgccgttgaagggcaagatcctcaacgtcgagaaagcacgcttcgac
aagatgatctcgtcccaggaagtgggcacgctgatcaccgcgctgggctgcggcatcggt
cgcgaagagtacaacatcgacaaactgcgttatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgccg
gagttgatcgagcgtggctacatctacatcgcccagccgccgctgtacaaggtcaagaaa
ggcaagcaagagcaatacatcaaagacgacgacgccatggaagagtacatgacgcagtcg
gccctggaagatgcgagcctgcacctgaacgaagaagccccgggcatttccggtgaagcg
ctggagcgtctggttaacgacttccgcatggtgatgaagaccctcaagcgtctgtcgcgc
ctgtacccgcaggagctgaccgagcacttcatctacctgccggctgtcagcctggaaatg
cttggcgaccacgccaagatgcaagactggctggcccagtacgaagtccgtctgcgcacc
gtcgagaagtcgggcctggtctacaaggccagcctgcgtgaagaccgtgaacgtggtgtg
tggctgccagaggtcgaactgatctcccacggcctgtcgaactacgtcaccttcaaccgc
gacttcttcggcagcaacgactacaagaccgtcgtcaccctcggcgctcaactgagcacc
ctgcttgacgagggcgcgtacatccagcgtggcgaacgcaagaaagcggtcaccgagttc
aaggaagcccttgactggctgatggccgaaagcaccaagcgccacaccatccagcgatac
aaaggtctgggcgaaatgaacccggatcagctgtgggaaaccaccatggacccaagcgtg
cgccgcatgctgaaagtcaccatcgaagacgccatcggcgcagaccagatcttcaacacc
ctgatgggtgatgcggtcgaacctcgccgtgacttcatcgagagcaatgctctggcggta
tccaacctggacttctga
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