KEGG   Pseudomonas monsensis: HV782_001310
Entry
HV782_001310      CDS       T07539                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pmoe  Pseudomonas monsensis
Pathway
pmoe03030  DNA replication
pmoe03410  Base excision repair
pmoe03420  Nucleotide excision repair
pmoe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HV782_001310 (polA)
   03410 Base excision repair
    HV782_001310 (polA)
   03420 Nucleotide excision repair
    HV782_001310 (polA)
   03440 Homologous recombination
    HV782_001310 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmoe03032]
    HV782_001310 (polA)
   03400 DNA repair and recombination proteins [BR:pmoe03400]
    HV782_001310 (polA)
Enzymes [BR:pmoe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HV782_001310 (polA)
DNA replication proteins [BR:pmoe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HV782_001310 (polA)
DNA repair and recombination proteins [BR:pmoe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HV782_001310 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HV782_001310 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: QXI00665
LinkDB
Position
complement(290230..293034)
AA seq 934 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYANLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDVELDDLQMGAEDPAKLYELYSLLEFKSWINDLDRDAKRQELSA
AAEPAPAGDLFSAPAEEAPVAPVEAAYETILDQARFDVWLEKLNNARLFAFDTETTGIDA
QQAQLVGLSFAVQANEAAYIPLTHSYIGVPEQLDRDTVLRALKPILEDPNKLKVGQHAKF
DMNILANCAIGGDQSQGIHVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQD
IAGKGAKQLTFDQIALEQAGPYAAEDADITLRLHQTLFEKLSAIPSLASVLTDIEMPLVP
VLARIERQGAFVDAELLGIQSIELGNKMVALEREAFEIAGEEFNLGSPKQLGVILYEKLG
LPVLKKTAKGQPSTAEEVLAKLAEDDHRLPKVLMEHRSMSKLKSTYTDRLPEQINPRTGR
IHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIM
AHLSKDEGLMNAFRNNLDVHTATAAEVFKVELNEVTSDQRRGAKAINFGLIYGMGAQKLG
KDIGVDTKTAKAYIDTYFARYPGVREYMDRTRAQAADQGYVETFFGRRLYLPEINSNKPQ
ERAAAERTAINAPMQGTAADIIKKAMVAVDNWLATSGLDAKVILQVHDELVLEVREDLVE
QVSAEIRVHMSEAAKLDVPLLVEVGVGNNWDEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcgtcttacctgtaccgtgctttccac
gcactgccaccgctgaccacctccaaaggcctgccgaccggcgcggtcaaaggtgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtcttcgac
gccaagggcgggacgtttcgcgatgagatgtacgccgaatacaaggccaaccgcccaagc
atgcccgacgacatgcgcgtgcagatcgagccgctgcaccagagcgtgatcgccctcggc
ttcccgctgctgtgcgtggaaggcgtcgaggctgacgacgtgatcggcaccctcgcccgc
agcagtgcggcggcggatcgcccggtgatcatctccaccggcgacaaggacatggcgcaa
ctggtcgacggccacattaccttggtcaacaccatgtccggtagctcgatggacgtagag
ggcgtgaaggagaaattcggcgtcgctccggagcagatcatcgattatctggcactgatg
ggcgattcttccgacaacatccccggcgttcccggcatcggcccgaagactgcgtccggc
ctgctggtgggcgtcaacggcggcctgaccgagctctacgcaaacctcgacatcgtcccg
accctgccgattcgcggggccaagaccctgccggccaagctcgaagagcacaaggagatg
gcgtttctctcctatcaactggcgaccatcaaggtcgatgtgccgctggacgttgaactc
gatgatttgcagatgggcgccgaagacccggccaagctctacgagctgtactcgctgctg
gaattcaaaagctggatcaatgatctggatcgcgacgccaagcgtcaggaactgagcgct
gctgccgagcctgcgccggctggcgatctgttcagcgcgccagcggaagaagcgcctgtc
gctcccgtcgaagctgcctacgaaaccatcctcgatcaggcgcgtttcgacgtctggctg
gagaaactgaacaacgccaggctgttcgccttcgacaccgaaaccaccggcatcgacgcg
caacaggcgcaactggtcggcctgtcgttcgccgtgcaggccaacgaagcggcgtacatc
ccgctgacccactcctacatcggtgtaccggagcaactggatcgcgacaccgtgctgcgc
gcgctcaagccgattctggaagacccgaacaaactcaaggtcggccaacacgccaaattc
gacatgaatatcctggccaactgcgccatcggcggcgatcagagccagggcatccacgtg
cgcgggattgccttcgacaccatgcttgagtcctacgtgctcaactccaccgccacccgc
cacgacatggacagcctcgcgcagaagtacctggaccacaccaccgtgagcttccaggac
atcgccggcaaaggcgccaagcaactgaccttcgaccagatcgccctggaacaggccggg
ccatacgccgccgaagacgccgacatcaccttgcggctgcaccagaccctgttcgaaaaa
ctcagcgcgatcccgagcctggccagcgtgctgaccgacatcgagatgccactggtgcca
gtgctggcgcgcatcgaacgccagggcgcgtttgtcgacgccgagctgctcggtatccag
agcatcgaactgggcaacaagatggtcgcgctggagcgcgaagcgttcgagatcgccggc
gaagaattcaacctcggctcgccgaagcagctgggcgtgatcctttacgaaaaactcggc
ctgccggtgctgaaaaaaaccgccaagggccagccgtccaccgccgaggaagtactggcg
aaacttgccgaggacgatcatcgcttgccgaaggtgctgatggagcaccgctcgatgagc
aagctgaaaagcacctacaccgatcgtctgccggagcagatcaacccgcgcaccgggcgc
atccacacctcgtaccatcaggccgtggcgtccaccggccgcttgtcttccagcgatccg
aacctgcagaacattccggtgcgtaccgcagaaggccggcgcatccgccaggctttcgtg
gcgccaaaaggttacaaactgctggcggcggactactcgcagatcgaactgcggatcatg
gcgcacctgtccaaagacgaaggcctgatgaacgccttccgcaacaacctcgacgtgcac
accgctaccgctgccgaagtgttcaaggtcgaactcaacgaagtgacctccgaccagcgc
cgtggtgccaaggcgatcaacttcggtttgatctatggcatgggcgcgcagaagctcggc
aaggacattggcgtcgacaccaagaccgccaaggcctacatcgacacctactttgcgcgc
tatcccggcgttcgcgagtacatggatcgcacccgcgcccaggcggcggatcaggggtat
gtcgagacgttcttcggtcgtcggctgtacctgccggagatcaactcgaacaagccgcag
gagcgtgcagccgccgaacgcacggcgatcaacgcgccgatgcagggcacggccgccgac
atcatcaagaaagccatggtcgcggtggataactggctggcgacatccgggctggacgcc
aaagtcatcctgcaggtgcacgacgaactggtgctggaggtgcgtgaggacctggtcgag
caggtcagcgcggagattcgcgtgcacatgagcgaggcggcgaaactggatgtgccgctg
ctggtcgaagtaggtgtgggcaacaattgggatgaggcccactaa

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