Pseudomonas monsensis: HV782_002385
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Entry
HV782_002385 CDS
T07539
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV782_002385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoe03019
]
HV782_002385
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_002385
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HV782_002385
Messenger RNA biogenesis [BR:
pmoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HV782_002385
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HV782_002385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QXI00866
LinkDB
All DBs
Position
552856..554784
Genome browser
AA seq
642 aa
AA seq
DB search
MHNTLEQVFGYPQFRPGQEQAISAVLAGRSAAAIFPTGSGKSLCYQVSAVLLPHLTLVVS
PLLALMQDQLAFLQRHGIPAGSIDSAQSRDDANDVMARARSGELKILMVSVERLKNERFR
NFLQQVPISLLVVDEAHCISEWGHNFRPDYLKLPDYQRQFNIPQALLLTATATPKVIADM
QARFAIAAEDVVTTGFYRPNLNLLVEPVRAQDKRRRLVEWMAERQGQPGIVYVTLQKTAE
HVAEHLVRNGIQAEAYHAGLPNDQREAIQKRFMAGQSKCIVATIAFGMGIDKSDIRQVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPERDGIRYVLDELH
ASVPEGQWEFLLGPLADQSNIRALPLKTLLVQLELRGLIAPRYAYYAEYRFKYLLEPEAL
LERFEGERRDFVAAIIHTSSRARTWATVNFEAMYTQYSAERSRVVKALDYFQEKGWIELE
SKQMTEVYSVLQSDFDSAVLSGELHAYFTRHEQAEVARIHAMLELFSTERCLGYRLAEYF
GDHQAPERCGHCSVCHGHIARLPAPPQLPSLVDKSFPALCGDFIHKHEQHAGSVPTAERL
TRFLCGISVPLFTRLKARTISGYAALEEYPYADVRRWVEEHL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaccctggaacaggttttcggttatccacagtttcgacccggtcaggagcag
gccatcagcgctgtattggccgggcgctcggcggcggcgattttccccaccggctcgggc
aaatccctgtgttatcaagtgtcggcagtgctgctgccgcatctgacgctggtggtttca
ccgttgctggcgctgatgcaggatcaactggcgttcctgcaacgccacggcatcccggca
ggcagcatcgattcggcacagagccgcgacgacgccaatgacgtcatggctcgtgctcgc
tccggtgagctgaagattctgatggtctcggtcgagcgcctgaaaaacgagcgatttcgc
aacttcctgcagcaggtgccgatctcgttgctggtggtggacgaggcgcactgcatctcg
gaatggggccacaatttccgtcccgactacctcaagctgccggactatcagcgccagttc
aacattccccaagccctgctgctgacggccaccgctacgccgaaagtcatcgccgacatg
caggccagattcgccattgccgccgaggacgtggtgaccaccggtttctatcggcccaat
ctcaacctgctggtggaaccggtgcgcgctcaggacaagcgccggcgcctggtggaatgg
atggccgaacggcaggggcagccgggcatcgtctacgtcaccctgcagaaaaccgccgag
cacgtcgccgaacaccttgtacgaaatggcatacaggccgaggcctatcacgccgggttg
cccaatgatcagcgtgaagccatccagaaacgcttcatggccgggcagtccaagtgcatt
gtcgcgaccattgcgttcggcatgggcatcgacaagagcgacatccgccaggtggtgcat
ttcgacttgcccaaatccatcgaaaactacagccaggaaatcggtcgggcagggcgcgac
gggcagccctcggattgtctggtgctggccaatcgcgacagcctcaacgtgctggaaaac
ttcgtttacggcgacacgccggagcgtgacggtattcggtatgtgctcgatgaattgcac
gcatcggtgcctgaggggcagtgggaatttctgctcggaccgctggcggatcagagcaac
atccgcgcgttgccgctcaagactttgctggtgcagctggagctgcgcgggttgatcgct
ccgcgctacgcctattacgccgaataccgtttcaaatacctgctggagcctgaggcattg
ctcgagcgcttcgagggcgagcgcagggactttgtcgcggcgatcatccacacctcaagc
cgtgcacgtacctgggcgaccgtgaatttcgaggcaatgtacacgcagtattccgctgag
cgcagtcgggtggtgaaggccctggattactttcaggaaaagggctggatcgaacttgaa
agcaagcagatgaccgaggtctacagcgtgctgcagagtgacttcgacagcgctgttttg
agcggtgagctgcatgcttacttcactcgccacgaacaagccgaagtggcgcggatacac
gcgatgcttgaactgttctcgaccgagcgttgcctggggtatcgcctggccgagtacttc
ggtgatcaccaggcgcccgagcggtgcgggcattgctcagtgtgtcatggccacatcgcg
cgtctgccggcgccaccgcagttgccatcgcttgtggataaaagtttcccggcgctgtgc
ggtgattttatccacaagcatgaacagcatgcaggcagtgttccgacggcggagcggctg
acacggtttctgtgcgggatcagtgtgccgttgtttaccaggctcaaggcgcggacgatc
tccgggtatgcggcgctcgaggaatatccctacgccgacgtgcgccgctgggttgaggaa
cacctctga
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