Pseudomonas monsensis: HV782_004940
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Entry
HV782_004940 CDS
T07539
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pmoe
Pseudomonas monsensis
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmoe03016
]
HV782_004940 (truB)
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HV782_004940 (truB)
Transfer RNA biogenesis [BR:
pmoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HV782_004940 (truB)
Prokaryotic type
HV782_004940 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXI01343
LinkDB
All DBs
Position
1173948..1174865
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGRADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggtatcatcctgctcgacaagccg
ttggggttcacctccaacgccgcgttgcagaaggttcgctggctgctcaacgccgagaag
gccggtcacaccggcagcctcgacccgctggccactggcgtgttgccgctgtgtttcggt
gaggccaccaagttctcgcagtacctgctcgattccgacaagggttatgaaaccctggcg
caactgggcaagaccaccaccacggcagacgccgagggtgaggttttgcaggagcgtccg
gtgaccgttggtcgcgccgacgtcgaagcggtcctgccgaaatttcgcggtcaaatcagt
cagataccgccgatgtactcggcactcaagcgtgatggccagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaatta
ctggccttcgaaggcgatactgcgcgtcttgcagtggattgcagcaaaggcacctatatt
cgtaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgcagaattg
cgccgtacccaggccgggcctttcactttggcgcaaaccgttaccctcgaagagctcgaa
gcggtacatgccgaaggcggcaacgaagcggtcgatcgcttcctgatgccatcggacagc
ggcctgcaggattggccgttgctgcacttttcggaagcgagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcgt
ttgattcggtcagaatga
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