Pseudomonas monsensis: HV782_004950
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Entry
HV782_004950 CDS
T07539
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV782_004950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoe03019
]
HV782_004950 (pnp)
03016 Transfer RNA biogenesis [BR:
pmoe03016
]
HV782_004950 (pnp)
Enzymes [BR:
pmoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HV782_004950 (pnp)
Messenger RNA biogenesis [BR:
pmoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HV782_004950 (pnp)
Transfer RNA biogenesis [BR:
pmoe03016
]
Prokaryotic type
tRNA degradation factors
HV782_004950 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
S1_TP0910
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI01345
LinkDB
All DBs
Position
1175473..1177578
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPAPEA
TELLGAIRAEFGDAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSAADVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgcatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgaccgtcgtcggtgccaagcaagccgatccgggcaagggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccggaagggttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaaaaagaccgatccggacatcgctgcgatgatcggtacttcggctgccctggctatt
tcgggcatcccgtttgacggcccgatcggcgccgctcgcgtcgctttccacgaaagcacc
ggctacctgctgaacccgacttacgaacaacaagccgcttcgagcctggacatggtcgtt
gccggtacctccgacgccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgcggtactgttcgctcacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgctgaagctgccaagccaacctggacctgggctccggcgccagaagcc
accgaactgctgggcgctatccgtgccgagttcggcgatgcgatctcccaggcttacacc
atcaccgtcaaggctgaccgctacgcacgtctgggcgagctgaaggatcaggttgttgcc
aagctgtccggtgaagaaggccagccttcggctgccgacgtcaaagccgctttcggcgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggtcgc
gacaccaagaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggcgctgttcacccgtggtgaaacccaggctctggtagtcgcgaccctgggcaccgcc
cgtgacgcacagctgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgctggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtttcggccatgctgccagccgctgac
gtgttcccgtacaccattcgtgtcgtgtcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtttgcggcgcttccctggccctgatggacgctggtgtgccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagagggcgagaagttcgccgtcctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgtaccgaactgtcggccaacgctccgaccatgatcgcgatgaaa
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagccgctgaagctgctcgtcagcgcgttctgggcatcaccgctgaagcc
gagatcggcaagatctatgtgggtaaagttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccaggcaaggacggtctggtgcacatctccatgctgagcgacgctcgcgta
gagaaagtgaccgacatcctgaaagaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagcggccaaggcatcgggc
gtgtaa
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