Pseudomonas monsensis: HV782_006250
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Entry
HV782_006250 CDS
T07539
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03410
Base excision repair
pmoe03430
Mismatch repair
pmoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HV782_006250 (recJ)
03430 Mismatch repair
HV782_006250 (recJ)
03440 Homologous recombination
HV782_006250 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_006250 (recJ)
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HV782_006250 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HV782_006250 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HV782_006250 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QXI01597
LinkDB
All DBs
Position
1466103..1467812
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AA seq
569 aa
AA seq
DB search
MRIEPRQLPATLPFLGDIPPLLTRLYAARGVQSEAELDKSLARLIPFQQLKGIDAAVDLL
VTALEQRQRILIVGDFDADGATASTVGMLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALTREPQLLITVDNGISSVEGVAAAKKAGLKVLITDHHLPGDELPQADALVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGWYESKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGIKAILEVAKRDAARITSTDLGFIVGPRLNAAGRLDDMSLGIEC
LLTADANRAREMAAQLDGMNQDRKSIEQGMQREALAQLKDLPVESMPFGLCLFDPEWHQG
VIGILASRMKERYFRPTIAFADAGDGLLKGSGRSVQGFHIRDALSVVAAQHPNLIAKYGG
HAMAAGLTLPQENFALFAEAFDAEVRRQLREEDLTGRMLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDVWPNPTIQ
WVELAYKLDVNEFRGNETVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaacctcgtcagctgcctgccactctgccttttctcggtgatattccaccg
ctgttgacccgcctgtacgccgcgcggggcgtgcagtccgaggccgaactggacaagagc
ctggcgcgcttgatcccgttccagcaactcaagggcattgatgcggcggtcgacttgctg
gtgacggcactggagcagcgccagcgcattctgatcgttggcgacttcgatgcggacggt
gcgaccgccagcaccgtgggcatgctcgggttgcgcctgttgggcgcggcgcatgtcgat
tatctggtgccgaaccgcttcgaatacggctatggcctgaccccggaaatcgtcgaagtc
gccctgacccgcgagccgcagttgctgattaccgtcgacaacggcatctccagtgtcgaa
ggcgtggccgctgcgaaaaaggccgggctcaaggtcttgatcactgaccaccacttgccc
ggcgatgaactgccgcaggccgatgcgctggtcaacccgaaccagccgggctgcgaattt
ccgagcaaggcgctggccggcgtgggcgtgattttctatgtactgatggccttgcgtgcg
cgcctgcgcagcctcggctggtacgagagcaaaccacaaccgaatatcggcgaactgctc
gatctggtggcgctgggcagcgttgccgacgtggtgccgctggatgccaacaaccggatt
ctggtgcatcagggcctggagcggattcgcgccgggcgcgcacggccggggatcaaggcg
atcctcgaagtggccaagcgcgacgctgcacgtattacgtccaccgacctcggttttatc
gtcggcccacgcctgaacgcggcggggcgcctggacgacatgagtctgggtatcgaatgc
ctgctgaccgccgacgccaaccgcgctcgggaaatggccgcgcaactggacggcatgaat
caggatcgcaaatccatcgagcagggcatgcagcgcgaggcgctggcccaactcaaggac
ttgccggtggagtcgatgccgttcggtctgtgcctgttcgatcccgagtggcaccagggc
gtcatcggtattctcgcgtcgcggatgaaagagcgttatttccgtccgaccattgccttc
gctgatgccggtgacggtctgctcaagggctccgggcgttctgtgcagggcttccatatt
cgcgacgccctgagcgtggtggcggcgcagcatccgaacctgattgccaaatacggtggt
cacgccatggcggccggcctgaccttgccacaggagaattttgcgctgttcgccgaggca
ttcgatgctgaagtgcgtcggcaacttcgcgaagaagacctgaccgggcgcatgctgtcg
gacggaacactggcggttgaggaattccacctcgaactggcccgtgccttgcgccatgcc
gggccttggggccagcacttcccggagccgctgttccacggcgtgtttcagttggtcgag
cagcgtgtggtgggtgagcggcatctgaaagtggtgctgaaaagcgagtgcggttcggtg
aagctcgacggcattgcctttggtatcgaccgcgatgtctggccgaatccgaccattcaa
tgggttgaactggcctacaagctcgacgtcaacgagtttcgtggcaacgagaccgtgcaa
ctgatgattgcccacatcgaaccgcgctga
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