Pseudomonas monsensis: HV782_006650
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Entry
HV782_006650 CDS
T07539
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03030
DNA replication
pmoe03430
Mismatch repair
pmoe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HV782_006650 (dnaE)
03430 Mismatch repair
HV782_006650 (dnaE)
03440 Homologous recombination
HV782_006650 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoe03032
]
HV782_006650 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_006650 (dnaE)
Enzymes [BR:
pmoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HV782_006650 (dnaE)
DNA replication proteins [BR:
pmoe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HV782_006650 (dnaE)
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HV782_006650 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QXI01673
LinkDB
All DBs
Position
1556579..1560100
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTGMNMPAVAVTDQNNMCSLVKFYKNAMGAG
IKPICGADLWLSNKDPDAPLSRISLLVMNAKGYRNLTELISRGFIEGQRNGMIIVEREWV
AEANEGLIMLSAAKEGEIGMAMIGGNPAEAEALAREWMAVFPDRFYLEIQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDIPDAIENTVEIAKRCNIEVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYT
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCATNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDDGRIVYGLGAI
KGVGEGPVEAITEARQEGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDADVYASHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGDLLKRHRGACPITMEYTSPDAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctg
gtgcggatcaagccactggtcaaggccctgaccggcatgaacatgcccgcggtggcagtc
accgaccagaacaacatgtgttccctggtcaaattctataaaaacgccatgggcgcaggc
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggatccggatgcgccgctg
agccggatcagtctgttggtgatgaacgccaagggctatcgcaacctcaccgagttgatc
tcgcgcggcttcatcgaaggccagcgcaacggcatgatcatcgtcgagcgcgagtgggtc
gccgaggccaacgagggcctgatcatgctgtccgccgccaaagaaggcgagatcggcatg
gccatgatcggcggcaaccccgcggaagccgaagcgctggcgcgtgaatggatggcggtg
ttcccggatcgtttctacctggaaatccagcgcaccaaccgtcccaatgacgaagaacaa
ctgcacggcgccgtggccttggccgacaagctcggcgcgccgctggtggcgaccaacgat
gtgcgcttcatcaagcaggaagacttcgcggcccacgaaacccgtgtatgcatcggtgag
ggccgtgccctcgacgatccgcggcgttcgaagaattacagcgatcagcaatacctcaaa
agcgccgaggaaatggccgagctgttcagcgacattcccgacgccatcgaaaacaccgtc
gagattgccaagcgctgcaacattgaggtgaagctgggcacgcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgacgaatacttccgcaaggtgtccttcgacggtctc
gaagagcgtctcgcggtgctgctgcccaaggacaccaccgaagactacgaagccaagcgt
caggtctacgtcgatcgcttgaatttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgccagta
ggtcctggccgggggtcgggtgccggctcgctggtggcttatgtgcagaagatcaccgac
ctcgatccgctggaatacgacctgctgttcgaacgtttccttaacccggaacgggtttcg
atgcccgacttcgacgtcgacttctgcatggacggtcgtgaccgggtgatcgactacgtg
gccgagaaatacggccgcaacgcggtgagccagatcatcaccttcggttccatggccgcc
aaggctgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gagatcctgcgtgacttcatcaaggtcgatgaagaagcggctgaaatctgggagatggcg
cgtaagctcgaaggtgtggtgcgtaacgttggtaagcacgcgggtggcgtggttatcgcg
ccgaccaaactgaccgacttctcgccgatctattgcgacgaggccggcgacggtctggta
acccaattcgacaaggacgacgttgaagccgccggtctggtgaagttcgacttcctcggt
ctgcggaccctgacgatcatcgactgggcgctgaaaaccattaaccgcgaccgcgccaag
gtcaacgagccgccgctggatatcgcgtttatcccgctggacgacaaaccgacctacacg
ctgttgcagaaagctgaaactacagcagtgttccagcttgaatcccgcggcatgaaggag
ctgatcaaaaagctcaagcccgactgcctggaagacttgatcgcactggtggcgttgttc
cgtccgggcccgctgcagtccggcatggtggacgacttcatcaaccgtaagcacggtcgc
gccgaactggcgtacccgcactcggactaccagtacgaaggcctcaagccggtattggcg
ccgacgtacggcatcatcctgtatcaggaacaggtgatgcagattgcccaggtcatggcc
ggttacaccctcggtggtgcggacatgctgcgtcgggcgatgggtaagaaaaaaccggaa
gaaatggccaagcagcgcggcggtttcattgaaggttgcgcgaccaataatatcgacgcc
gaccttgccggtaacatcttcgatctcgtagagaaattcgccggttacggcttcaacaaa
tcccactccgccgcttacggcctggtttcgtaccagaccgcctggctgaaagcccactac
ccggcgccgttcatggccgcggtactctcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcaccatgaagctgcgcctcgacgcgccggacgtgaacact
tccgagttcaagttcacggtgaacgacgacggccgcatcgtgtatggcctcggggcgatc
aaaggcgtcggcgaaggtccggttgaggcaattaccgaagcgcgtcaggaaggtccgttc
aaggatctgttcgatttctgcgcccgggtcgatctcaaacgcatcaacaagcgcacgctg
gacggtttgatccgcagcggtgcactggatcgcctcggaccgtactttcacgacgaacaa
aaggcttatcaggccaacatcgaccgtaaccgcgccgtgctgctggcggcgatggaagag
gcgatcaaggccgccgaacaaaccgcgcgtacccacgacagcggtcacgccgatctgttt
ggcgggctgttcgtcgaggaagacgccgacgtttatgcgtcgcatcgcaaggccaaggag
ctgaccctcaaggaacgtctcaaaggtgagaaagacaccctgggcctgtacctgaccggt
cacccgatcgacgaatacgaaggcgagatccgccgtttcgcccggcagcgcatcatcgac
ctgaagccggcccgcgacacgcaaaccgtggccgggatgatcattgccctgcgggtgatg
aagaacaagaagggcgacaagatgggcttcattaccctcgacgaccgctcggggcggatc
gaggcgtcgctgttcgccgatgcgttccactccgcacagtcgctgttgcagaccgatgca
atggtggtggtcgaaggcgaggtcagcaacgacgacttctccggcggcctgcgcctgcgg
gtcaagcgcgtgatgagcatggaagatgcgcgcaccaacctggccgagagtctgcgtttg
aagctgcagactcaggatctgaaaggcgatcagctacgctggttgggggatttgctcaag
cgtcatcgcggggcgtgcccgatcaccatggaatacaccagtcccgatgcgaagaccttg
ctgcagttcggcgagacctggcggatcgacccggcggatgccttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
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