Pseudomonas monsensis: HV782_007910
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Entry
HV782_007910 CDS
T07539
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pmoe
Pseudomonas monsensis
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmoe03016
]
HV782_007910 (rnd)
Enzymes [BR:
pmoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
HV782_007910 (rnd)
Transfer RNA biogenesis [BR:
pmoe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HV782_007910 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QXI01913
UniProt:
A0AAX1P7Y3
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All DBs
Position
1814240..1815373
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AA seq
377 aa
AA seq
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MAIDIHWIRDNESLAQFCAEWQQLPFVALDTEFMRVDTFYPIAGLLQVGDGKRAYLIDPL
SINAWQPLAALLENPAVLKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGY
SRLVQEVLGIELPKGETRSDWLQRPLSDTQISYAAEDAVHLAEVFVQLRPKLSDDKFAWV
LEDGAELVANLRRETDPYEVYREAKLAWKLSRAQLAVLRELCAWREKEARARDLPRNRIV
REHSLWPLARTQPDNLAALGKIEDMHPRTVRQDGQFLLDLIKRSGSVGPDQWPPAVPEPL
PIEAAALIKQLRALGQAEAERLGIAPELMLRKKTLEALVKSGYPEGPYQLPDSLRGWRRE
LMGQKLLDSLATAGEQP
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggctatcgatattcactggattcgcgacaacgaaagcctcgcgcagttttgcgccgag
tggcagcagctgccgttcgttgccctcgacaccgaattcatgcgggtcgacaccttctac
ccgattgccggtctgttgcaggtcggtgacggcaagcgcgcctacctgattgatccgcta
agcatcaacgcctggcaaccgctggctgcgttgctggaaaacccggcagtgctcaaggtg
ctgcacgcgtgcagcgaagacctcgaagtcctgttgcgcctgaccggcagcctgccggca
ccgctgttcgacacccagttggcagccgcttacctgaacctcggtttctcgatgggctat
tcgcggctggtgcaggaagtgctcggcatcgaactgcccaagggcgaaacccgttccgac
tggttgcagcgcccgttgtccgacacgcaaatcagctacgccgccgaagatgccgtgcat
ctggcggaggttttcgtacaactgcggcccaaactgtctgacgacaaattcgcctgggtg
ttggaggacggcgcggaactggtcgccaacctgcgccgcgaaaccgacccttacgaggtt
tatcgcgaggccaaactggcgtggaaactgtcccgtgcgcaactggcggttctgcgtgag
ctgtgtgcctggcgggaaaaggaagcccgcgcccgtgatctaccgcgtaaccgcatcgtc
cgcgagcattcgctgtggccgctggcccgcacacaaccggacaacctcgcggcgttgggc
aagatcgaagacatgcacccgcgtaccgtgcgtcaggacggccaatttctgcttgatctg
atcaagcgctctggcagtgtggggcctgatcaatggccgcccgccgtaccggagccatta
ccgatcgaagccgcagcattgatcaaacaactgcgcgcattgggtcaggccgaggccgag
cgtctgggcattgccccggaactgatgctgcgcaagaaaaccctcgaggcgctggtcaaa
agcggctaccccgaggggccttaccaattgcctgattcgctgcgtggctggcgccgcgaa
ttgatgggccagaagctgctcgacagcctggccaccgccggagaacagccttga
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