Pseudomonas monsensis: HV782_014100
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Entry
HV782_014100 CDS
T07539
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmoe
Pseudomonas monsensis
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoe03032
]
HV782_014100
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_014100
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HV782_014100
DNA replication proteins [BR:
pmoe03032
]
Prokaryotic type
DNA Topoisomerases
HV782_014100
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HV782_014100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI03046
LinkDB
All DBs
Position
complement(3193873..3194910)
Genome browser
AA seq
345 aa
AA seq
DB search
MPDTVLTDALPPDLHYVDDTQPGITRKKLRGKFSYFEPSGQRITDPDEIKRINALAVPPA
YIDVWICVDPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
ALLAAPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGDRHTVSSSDVNAYLQTLTG
ADFTAKDYRTWAGSALALAVLRELTHESETEAKRHVVEMVKGVAKQLGNTPAVCRKCYIH
PAVVEKFMLGALAQLPRPRVRKGLRAEEVALAMFLEQMSEMTDAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacaccgtgctgaccgacgcactgcccccagacctgcactatgtcgatgacacc
cagcccggtatcacgcgcaagaaactgcgcggcaagttcagctacttcgaaccctctggc
cagcgcatcactgacccggacgaaatcaaacgcatcaacgccctcgcggtgccgccggcc
tatatcgacgtgtggatctgcgtcgacccgcgtggccacctgcaagccactgggcgcgat
gcccgtggccgcaaacaataccgctatcacgcgcgctggcgcgaagtgcgcgatgccgac
aagtattcacgcctgcgcgaatttggcctggcgctgccgaaattgcgcaaacagctggaa
gcgctgctggccgcgcccggtttcagtcgcgacaaagtcatggccacggtgatcaccctg
ctcgatgccacgctgattcgtgtcggcaacacgcaatatgcgcgggataaccgttcctac
ggcctgacgaccttgcgcagccgacatgtcgaggtcaacggcagtgcgatcctgttccag
tttcgcggcaagagcgggatcgaacatcaaatcaccgtcaaggatcgccgtctggcgcga
atcatcaagcgctgcctggaaatccccgggcagaacctgtttcagtatctggatgaaaac
ggtgaccgccacacggtcagctcttccgacgtcaatgcgtatctgcaaaccctgaccggc
gccgactttaccgccaaggactaccgcacttgggccggcagcgccctggcattggcggtg
ttgcgtgagctgactcacgaatcggagaccgaagccaaacgccacgtcgtcgagatggtc
aagggcgtcgccaaacagctgggcaatacgccagcggtgtgccgcaagtgctatatccat
cccgctgtggtggaaaaattcatgctcggcgcactggcgcaactcccccgtccgcgagtg
cgcaaagggctgcgcgccgaagaagtggcgttggcaatgtttctcgagcagatgagcgaa
atgaccgacgcgccttga
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