Pseudomonas monsensis: HV782_020380
Help
Entry
HV782_020380 CDS
T07539
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV782_020380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoe03019
]
HV782_020380
03009 Ribosome biogenesis [BR:
pmoe03009
]
HV782_020380
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HV782_020380
Messenger RNA biogenesis [BR:
pmoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HV782_020380
Ribosome biogenesis [BR:
pmoe03009
]
Prokaryotic type
rRNA helicases
HV782_020380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
QXH98905
LinkDB
All DBs
Position
complement(4644327..4646000)
Genome browser
AA seq
557 aa
AA seq
DB search
MTQEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF
ALPILHRIDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPET
RQTVLFSATLPQSIRAIAERHLRDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALDAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGELLDRLTADIGCTPRAL
AAALLRKATNGQALNLAAIEKERPLVPNNAPRGDRPERSGDRPDRGDRERRAPMPLGEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLDKLLTKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggcttcgccgctcttgaacttcatcctaatattgtcgctgca
gtagtcgctaccggctatgaagagccttcggccattcagcagcagtcgatcccgatcatc
ctcgccggtcacgatatgattggtcaggcgcaaaccggtaccggtaaaaccgctgccttt
gccctgcctatcctgcaccgcattgatccgtccaagcgcgagccgcaagctctgatcctg
gccccaactcgtgagttggcgctacaagttgcaaccgctttcgaaacctacgccaagcaa
atgccgggcgtaactgttgtggctgtctacggcggcgcgccgatgggcccacaattgaaa
gcaatccgtaatggcgcacagatcgttgtcgccacaccgggccgtctgtgcgaccacctg
cgtcgcgacgaaaaagtcctcgctaccgtgaaccacctggttctggacgaagcagacgaa
atgctcaaactcggtttcatggacgacctggaagtgatcttcaaggccatgccggaaacc
cgtcagaccgtattgttctcggcgaccctgccgcagtcgatccgtgccatcgccgagcgt
cacctgcgcgatccgaagcacgtgaagatccagagcaagacccagaccgttaccgcgatc
gaacaggctcacctgttggttcacgctgaccagaagacttcggccgttctcagcttgctg
gaagtggaagatttcgacgctctgatcatgttcgtacgcaccaagcaagcgaccctggat
ctggccagcgccctcgacgccaaaggctacaaagccgcggcgctgaacggtgacatcgcc
cagaaccagcgtgagcgcgtcatcgactcgctgaaagatggccgtctggacatcgttgtc
gcgaccgacgtagctgctcgtggtctggacgttccgcgcatcactcacgtgttcaacgtt
gacatgccgtacgacccagagtcctacgttcaccgtatcggccgtactggccgtgccggt
cgcgaaggtcgtgcgctgctgctggtgactccacgtgagcgccgcatgctgcaagtgatc
gagcgtgtcaccggtcagaaggtggctgaagttcgcctgccggacgctcaagccgttctc
gatgcacgcatcaagaaactgaccaacagcctgtcgccgctggtcgctgatgccgaatcg
actcacggtgagctgctggatcgtctgaccgctgacatcggttgcaccccgcgtgcactg
gctgcagccctgctgcgcaaggctaccaacggtcaggcgctgaacctggcagcgatcgag
aaggaacgtccactggtgccgaacaacgcaccgcgtggcgaccgtcctgagcgttccggt
gaccgtcctgatcgtggtgatcgcgagcgtcgcgcgccaatgcctctgggcgaaggccgt
gcccgttgccgtaccgcgctgggtgcgcgtgacggtatcgccgccaagaacctgctgggc
gccatcctcaacgaaggcggtctggcccgtgaagcgatcggtcgcatccaggtgcgtgac
agcttcagcctcgtcgagttgccggaagatggtctggataagctcctgaccaagctgaag
gacactcgcgttgctggcaagcagttgaagctgcgtcgctatcgcgaagattga
DBGET
integrated database retrieval system
