Pseudomonas monsensis: HV782_022665
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Entry
HV782_022665 CDS
T07539
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HV782_022665 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoe03400
]
HV782_022665 (sbcB)
Enzymes [BR:
pmoe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HV782_022665 (sbcB)
DNA repair and recombination proteins [BR:
pmoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HV782_022665 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HV782_022665 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HV782_022665 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QXH99329
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All DBs
Position
complement(5129788..5131218)
Genome browser
AA seq
476 aa
AA seq
DB search
MTSIFWYDYETTGINPRSDRPLQVAGIRTDHALNEIDEPVNLYCQPSEDILPHPAACAIT
GITPSQLAEQGLSEADFMTRVHAQLAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRAAYALRPDGLVWPTDDEGRVTLKLERLTAANHIDHGHAHEALSDV
RATIALARLIREKQPKLYDWLFQLRSKQKVMDQIRLLQPLVHVSGRFSAARSYVGVVLPL
AWHPKNRNALIVCDLHLDPQGLLDLDAQTLRQRLYTRRDDLPEGQLPVPLKLIHINRCPV
VAPLAVLRGEDQQRLGLDMALYQARALRLTDAQQVWKDKVAAIYASEDFIPSEDPEQQLY
DGFIGDRDRRLCEQVRSADPAQLAQEQWPFDDERLPELLFRYRARNFPDTLNSEEQERWR
IFCQQRLSAPEWGAPNTLASFTEAADEWMHSATASQKEVLNQWQNYVQALRKRLDL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacttctatcttctggtacgactacgaaaccactggcatcaatccccgtagcgatcgc
ccgttgcaggtggcggggattcgcactgaccacgcgctcaacgaaatcgacgagccggtc
aacctctactgccagcccagcgaagacatcctgccgcatccggccgcctgtgccatcacc
ggtatcaccccgagccagctcgccgaacagggcttgagcgaagccgatttcatgacccgc
gtgcacgcgcagcttgctgcgccaggcacgtgtggcgcgggttacaacaccctgcgtttc
gatgatgagatgacgcgttacagtctgtatcgcaatttcttcgacccctatgcccgcgag
tggcagggcgggaacagtcgctgggatctgattgatgtggtgcgtgcggcctatgccttg
cgccccgacggtctggtctggccgaccgatgacgaaggccgggtgaccctcaagctcgaa
cgcctgaccgccgccaatcacattgatcacgggcatgcccacgaagcgttgtccgacgtg
cgcgcgaccatcgccctagcgcgcttgatccgtgagaagcagccaaaactctatgactgg
ctgtttcagttgcgcagcaagcagaaggtgatggatcagattcgcctgttacagcctttg
gtgcatgtgtccgggcgcttctcggcggcgcgcagttacgtcggtgtggtgctgccactg
gcctggcacccgaagaatcgcaatgccttgatcgtctgcgatctgcacctcgatccgcag
ggcttgctcgatcttgacgcgcagaccctgcgccagcggctgtacacccgtcgtgacgat
ttgcccgaaggccaactgccggtgccgctcaagctgattcacatcaatcgttgcccggtg
gtcgcgcccctggcggtgttgcgtggcgaagatcagcagcgtctggggctggacatggcg
ttgtatcaggcacgagcactgcgactaactgacgcacaacaagtttggaaagataaagtc
gcggccatttatgccagcgaagatttcatccccagcgaagatccggagcaacagttgtac
gacggatttatcggtgaccgcgatcgacgtctatgtgagcaagtcagaagcgctgaccct
gctcaactagcgcaagagcaatggcctttcgatgatgaacgtttgcccgaattgctcttt
cgatatcgagcgcgcaactttcccgatacgttgaattctgaagagcaagaacgctggcgg
atattttgtcagcagcgtttgtctgcgccggaatggggcgctccgaataccttggcatct
tttacagaggcggccgacgaatggatgcatagtgcgacggcgagtcagaaagaggtgctc
aatcaatggcagaattatgtccaggcattacgcaaacgtttggatctttga
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