Pseudomonas monsensis: HV782_028300
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Entry
HV782_028300 CDS
T07539
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe00300
Lysine biosynthesis
pmoe00470
D-Amino acid metabolism
pmoe01100
Metabolic pathways
pmoe01110
Biosynthesis of secondary metabolites
pmoe01120
Microbial metabolism in diverse environments
pmoe01230
Biosynthesis of amino acids
Module
pmoe_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HV782_028300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HV782_028300 (dapF)
Enzymes [BR:
pmoe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HV782_028300 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QXI00384
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All DBs
Position
6378570..6379400
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQATSYQLEVDGTTVELAAVSMGNPHAVLRVQDINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcatggcctgggcaatgatttcatggttctcgacctg
gtcagccagcacgcgcatattcagcccaagcacgccaagcaatggggcgaccggcacacc
ggtatcggtttcgaccagttgctgatcgttgaagcgccgagcaacccggacgtggatttc
cgttaccggatcttcaactccgatggctcggaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcgcgcttcgtgctggacaagcgtctgacagcgaaacggcagatccgcgtcgag
accaagggtggcatcatcgaactggacgtgcgtaacgacggccagatcggcgtcaacatg
ggcgcgccgcgcctggtgccagcggacattccgttcgaagcgccagcgcaggcgaccagc
tatcagctggaagtcgacggcaccacggtcgaactggccgccgtgtcgatgggcaacccc
catgccgtgctgcgtgtgcaggacatcaacagtgcaccggtgcatgagctgggaccgaaa
atcgaacaccatccgcgcttcccggcgcgggtcaatgtcggtttcctccaggtcatcgac
cgcaaccgtgcgcaactgcgcgtctgggaacgcggcgccggggaaacccaggcctgtggt
actggcgcttgcgctgcggctgtcgcggcaatcagtcaggggtggatggattcgccgctg
ttgatcgacctgcccggcgggcgtctgtccattgaatgggcaggccctggccaaccggtg
ctgatgaccggtccggcagtgcgtgtatacgaaggacaagtgcgtctttga
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