Pseudomonas mosselii: CLJ08_05105
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Entry
CLJ08_05105 CDS
T07806
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJ08_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmol03019
]
CLJ08_05105
03009 Ribosome biogenesis [BR:
pmol03009
]
CLJ08_05105
Enzymes [BR:
pmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLJ08_05105
Messenger RNA biogenesis [BR:
pmol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLJ08_05105
Ribosome biogenesis [BR:
pmol03009
]
Prokaryotic type
rRNA helicases
CLJ08_05105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ATB64017
UniProt:
A0A1X1P0X0
LinkDB
All DBs
Position
complement(1035654..1037330)
Genome browser
AA seq
558 aa
AA seq
DB search
MTQETGGFAALELNPNIVAAVLATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF
ALPILNKIDVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLR
AIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPAT
RQTVLFSATLPASIRAIAERHLREPKHVKIQSKTQTVTAIEQAHLMVHADQKIPAVLRLL
EVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI
ERVTGQKVAEARLPNPQAVLDARIKKLTKSLAPLVAESEASHGELFDRLTADLGCTPRAL
AAALLRKATNGQALDLASVEREQPLVPTYTPRERGERTERGERPDRGDRERRAPMPLAEG
RVRCRTALGARDGIAAKNLLGAILNEGGLARDAIGRIQVRDSFSLIELPEDGLERLLTKL
KDTRVAGKQLKLRRYRED
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaaccggcggattcgccgctctcgaactcaatccgaacatcgttgctgcc
gtcctggccaccggctatgaagagccgtcggccatccagcaacagtcgatcccgatcatc
ctcgccggtcacgacatgatcggccaggcgcagactggcaccggcaagaccgctgccttc
gccctgccgatcctcaacaagatcgacgtgagcaagcgcgaaccgcaagccctgatcctg
gcgccaacccgtgagttggcgctgcaagtagccaccgctttcgaaacctacgccaagcag
atgccgggcgttaacgtggtggccgtgtacggtggtgccccgatgggcccacagctgcgt
gccattcgcaatggcgcacagatcgtcgtcgccaccccgggccgcctgtgcgaccacctg
cgccgcgacgagaaagtcctgtccaccgtccagtacctggtactcgacgaagccgacgag
atgctcaagctgggcttcatggatgacctcgaagtgatcttcgatgccatccctgccacc
cgccagaccgtgctgttctccgccaccctgccggcctcgatccgtgccatcgccgagcgc
cacctgcgcgagccgaagcacgtcaagatccagagcaagacccagaccgtgaccgcgatc
gagcaggcccacctgatggtccacgccgaccagaagatcccggccgtgctgcgcctgctg
gaagtggaagagttcgacgcgctgatcgccttcgtgcgcaccaagcaggccaccctggac
ctggccgccgccctggaagccaaaggctacaaggctgccgcgctgaacggcgacatcgcc
cagaaccagcgtgagcgcgtgatcgactcgctcaaggacggccgcctggacatcgtcgtc
gccaccgacgtcgctgcccgtggcctggacgtgccgcgtatcacccacgtgttcaacgtc
gacatgccgtacgacccggagtcctacgtgcaccgtatcggccgtaccggccgtgccggt
cgcgatggccgtgcgctgctgctggtcaccccgcgcgagcgtcgcatgctgcaggtgatc
gagcgtgtcaccggccagaaagtcgccgaagcccgcctgcctaacccgcaagccgtgctg
gatgcgcgcatcaagaagctgaccaagagcctggcgccgctggtggccgagtccgaagcc
agccacggcgaactgttcgaccgcctgaccgccgacctgggctgcaccccgcgtgccctg
gccgcggccctgctgcgcaaggcgaccaacggccaggcgctggacttggcttcggtggag
cgcgagcagccgctggtgccgacctacaccccgcgtgagcgtggtgagcgcaccgagcgc
ggcgagcgtccggaccgtggtgaccgcgagcgccgcgcgccgatgccgctggccgaaggc
cgcgtgcgttgccgtaccgccctgggtgcccgtgacggcatcgccgccaagaacctgctg
ggcgcgatcctcaacgagggtggcctggcgcgtgacgccatcggtcgcatccaggtgcgt
gacagcttcagtctgatcgagctgccggaagacggcctcgagcgcctgctgaccaagctc
aaggacacccgcgttgccggcaagcaactgaagctgcgccgctaccgcgaagattga
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