Pseudomonas mosselii: CLJ08_07915
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Entry
CLJ08_07915 CDS
T07806
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
pmol
Pseudomonas mosselii
Pathway
pmol02020
Two-component system
pmol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLJ08_07915
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLJ08_07915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmol03021
]
CLJ08_07915
Transcription machinery [BR:
pmol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLJ08_07915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
ATB64553
UniProt:
A0A290GZ75
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All DBs
Position
1639159..1640658
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AA seq
499 aa
AA seq
DB search
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGEDFDNSD
PMADNAENKPAAEVQDNSFQETSTSSTAENLEDGEWAERIPNELPVDTAWEDIYQTSASS
LPSNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIAVTLIDSINGQGYLEDSLE
EICAGFDPELDIELDEVEAVLHRIQQFEPAGIGARSLGECLLLQLRQLPASTPWMGEAQR
LVTDFIDLLGSRDYSQLMRRMKLKEDELRQVIELVQTLNPRPGSQIESSEPEYVVPDVIV
RKDSERWLVELNQEAVPRLRVNPQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNE
TLMKVATQIVEHQRGFLDHGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYE
LKYFFSSHVSTAEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTV
AKYRESLGIAPSSERKRLM
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctcgtcctaaaaatgggccagcaactgacgatgaccccgcagttgcaa
caggccatccgtctgcttcagctctccaccctggacctccagcaggaaatccaggaagcg
ctggagtccaatccgatgctcgaacgtcaggaagacggcgaggacttcgacaacagcgac
ccgatggcggacaacgccgagaacaagccggcggccgaagtccaggacaacagtttccag
gaaaccagtaccagcagcaccgcggaaaacctcgaagacggcgaatgggccgagcgcatc
cccaacgagctgccggtcgacaccgcctgggaagacatctaccagaccagcgccagcagc
ctgccgagcaatgatgacgacgagtgggacttcaccacccgcacctcggtcggcgagagc
ctgcagagtcacctgctgtggcagctcaacctggcaccgatgtccgataccgaccgcctg
atcgccgtcaccctgatcgacagcatcaacggccagggctacctggaagactccctcgag
gagatctgcgcaggcttcgacccggaactcgacatcgagctggacgaggtcgaggcggtg
ctgcaccgcatccagcagttcgaacctgccggcatcggcgcccgttccctcggtgaatgc
ctgctgctgcaactgcgccaactgccggcctcgacgccttggatgggtgaggcccagcgc
ctggtcaccgacttcatcgacctgctcggcagccgcgactacagccagctgatgcgccgc
atgaagctcaaggaagacgagctgcgccaggtcatcgaactggtgcagaccctcaacccg
cgccccggctcgcagatcgagtccagcgaacccgagtacgtcgtgcccgacgtcatcgtg
cgcaaggacagcgagcgctggctggtcgagctcaaccaggaagcggtaccgcgcctgcgg
gtcaacccgcagtacgccggcttcgttcgccgcgccgacaccagcgccgacaacaccttc
atgcgcaaccagctgcaggaagcgcgctggttcataaagagcctgcagagccgcaacgag
acgctgatgaaggtggcgacgcagatcgtcgagcaccagcgcggcttcctcgaccatggc
gacgaggccatgaagccgctggtgctgcacgatatcgccgaggcagtgggcatgcacgag
tcgaccatttcccgggtgaccacgcagaaatacatgcacaccccgcgcggcatctacgaa
ctgaaatactttttctccagccacgtgagcaccgccgaaggcggcgaatgctcgtccacg
gcgatccgcgcgatcatcaagaaactggtggcggcggaaaatcagaaaaagccattgagt
gacagcaagatcgctggtttactggaggcacaaggcatccaggtagcccgtcgcaccgtc
gccaagtaccgtgaatcgttgggcatcgccccatcgagcgagcgcaagcgactgatgtag
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