Pseudomonas mosselii: CLJ08_10465
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Entry
CLJ08_10465 CDS
T07806
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJ08_10465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmol03019
]
CLJ08_10465
Enzymes [BR:
pmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLJ08_10465
Messenger RNA biogenesis [BR:
pmol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLJ08_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ATB65020
LinkDB
All DBs
Position
2216826..2218721
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AA seq
631 aa
AA seq
DB search
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLNFISACIFGGVGMN
PQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHDVKKVLAR
LPAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALL
AHLITLGAWEQVLVFTRTKHGANRLAEYLEKHGLTAAAIHGNKSQNARTKALADFKANTV
RVLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISMVAPDEEKL
LKSIERVTKQKIPDGDLMGFDASQVEAEKPEVRERQLNSGRGGRNQQPRGEGGKEGSGGR
KDKGKDKGRNKPAGEKQADKEKTGDKQQQGQQQRKPRDKKPRQQQVAQGQKAIPPVPADR
DPEEFLDDDVDNFGNRADYVSPYQNAKNQGRNRRPGGNGGQGQGQRSGGGQAQGQGRGNG
QQRQGQGSGEKRPRNGGGSNGGARRDNNGGRNRRDESARQEPAVRNPRESQSAPVIIRKE
SKLDRYPTPEQLDDLPSRPRGERPALLTRKG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggctcttgtccgcgctatcgaggcagcgggc
tacacccagcccactccggtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac
ctgatggtcgccgcccagacaggtactggtaaaaccggcggcttcgcgctccccatcctc
gagcgcctgttcccgggtggccaccccgacaaatcgcaacgccacggcccgcgccaaccg
cgcgtgctggtgctgaccccgacccgcgagctggccgcccaggtgcatgacagcttcaag
gtctatgcccgcgacctgaacttcatcagcgcctgcatcttcggcggcgtcggcatgaac
ccgcaggtccaggccatggccaagggcgtcgacgtcctggtcgcctgcccgggccgcctg
ctcgacctggccggccagggcagcgtcgacctttcgcgggtcgagatcctggtgctggac
gaagccgaccgcatgctcgacatgggcttcatccacgacgtcaagaaagtgctggcgcgc
ctgccggccaagcgccagaacctgctgttctcggcgaccttctccaaggacatcaccgac
cttgccgacaagctgctgcacaaccccgagcgcatcgaggtcacgccgccaaacaccacc
gtcgagcgtatcgagcagcgtgtctaccgcctgccggccagccacaagcgcgccctgctg
gcgcacctgatcaccctgggtgcctgggaacaggtactggtgttcacccgtaccaagcac
ggcgccaaccgcctggccgagtacctcgagaagcacggcctgaccgctgcggcaatccac
ggcaacaagagccagaacgcccgcaccaaggccctggccgacttcaaggccaacaccgtg
cgcgtgctggtcgccaccgacatcgccgcccgcggcctggacatcgaccagttgccccat
gtggtcaacttcgagctgcccaacgtcgaggaagactacgttcaccgcatcggccgcacc
ggccgtgccggtcgctcgggcgaggccatctcgatggttgccccggacgaagagaagctg
ctcaagagtatcgagcgcgtcaccaagcagaagatcccggacggcgacctgatgggcttc
gacgcctcccaggtcgaggccgagaagccggaagtccgcgagcgccagctgaactctggt
cgcggtggccgcaaccagcaacctcgcggcgaaggcggcaaggaaggcagtggcggacgc
aaggacaagggcaaggacaaaggccgcaacaaacctgcgggcgagaagcaggccgacaag
gaaaagaccggcgacaagcagcagcaaggccagcagcagcgcaagccgcgtgacaagaag
ccacgccagcagcaggtcgcacagggccagaaggccatccccccggtccccgccgatcgt
gacccggaagagtttctggacgacgatgtggataacttcggcaaccgtgccgactacgtc
agtccttatcagaacgccaagaaccaaggccgcaaccgtcgcccaggtggcaatggcggc
caaggccaaggccaacgcagtggtggtggccaggctcaaggtcaaggccgtggcaatggc
caacagcgccaaggccagggctcgggtgaaaaacgcccgcgcaacggtggtggcagtaat
ggcggtgctcgtcgtgacaacaacggtggccgtaaccgccgtgacgaatcggctcgccag
gaacccgccgtgcgcaacccgcgcgagtcccagagcgcgccggtgatcattcgcaaggaa
tccaagctcgaccgttacccgacgcccgagcaactggacgacctgccgagccgcccacgc
ggtgagcgtccggcgctgctgacccgcaagggctga
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