Pseudomonas mosselii: CLJ08_12325
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Entry
CLJ08_12325 CDS
T07806
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03030
DNA replication
pmol03410
Base excision repair
pmol03420
Nucleotide excision repair
pmol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLJ08_12325
03410 Base excision repair
CLJ08_12325
03420 Nucleotide excision repair
CLJ08_12325
03440 Homologous recombination
CLJ08_12325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmol03032
]
CLJ08_12325
03400 DNA repair and recombination proteins [BR:
pmol03400
]
CLJ08_12325
Enzymes [BR:
pmol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLJ08_12325
DNA replication proteins [BR:
pmol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLJ08_12325
DNA repair and recombination proteins [BR:
pmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLJ08_12325
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLJ08_12325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
REF
Motif
Other DBs
NCBI-ProteinID:
ATB65371
LinkDB
All DBs
Position
complement(2623240..2625990)
Genome browser
AA seq
916 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDIAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLRDLYDNLDKVPALAIRGAKTLPAKLEEHRDA
AFLSYELATIKCDVELDVEVDALVCGEPDREALLALYTEMEFKSWVAEVQRSAPQAGGSV
AADVEPVAEKVEPKYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQQAQLVGLSFAV
EPHEAAYVPLAHDYEGAPAQLDRDAVLLALKPLLEDPAKGKIGQNAKYDINILANGSPAI
LMRGVAYDTMLESYVLDSTATRHDMDSLAQKYLDHTTIGFEDIAGKGAKQLTFNQIPLEK
AGPYAAEDADITLRLHHALQARLAKTPSVLPVLMDIEMPLVPVLAKIERQGALVDAALLG
VQSGELGAKLVELEREAYALAGEEFNLGSPKQLGAILYDKLGMPVLSKTAKGQPSTAEAV
LDDLAEQGYPLPKVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQAVAATGRLSSS
DPNLQNIPVRTAEGRRIRQAFVASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLD
VHRATAAEVFGVALADVTSDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYF
ARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTA
ADIIKRAMVAVDNWLTDSKLDARVILQVHDELVLEVREDLVEQVKDEIRGYMSGAAELDV
PLLVEVGVGSNWDEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcgtcctacctctaccgcgcctttcac
gcgctgccgccgctgaccacctccaagggcatgcccaccggcgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcagtacccggacagcctgttcgcggtggttttcgac
gccaagggcgggaccttccgcgacgccatgttcgccgagtacaaggccaaccgcccaagc
atgcccgacgacctgcgggtgcaggtcgagccgctgcacgccagcgtccgcgccctcggc
tacccgctgttgtgcgtcgaaggcgtggaggccgacgacgtcatcggcaccctggcgcgc
agcagcgccgccgctggccgtccggtgatcatctcgaccggcgacaaggacatggcccag
ctggtggacggccatgtcaccctggtcaacaccatgaccggcagcgtgctggacatcgcc
ggtgtgcacgagaagttcggcgtaggtcccgagcacatcatcgattttctcgccctgatg
ggcgacaaggtcgacaacatccccggcgtgccgggcgttggcgagaagaccgcggtcggc
ctgctgaccggtatcggcggtggccttcgcgacctgtacgacaacctcgacaaggtgccg
gccctggccatccgtggcgccaagaccctgccggccaagctcgaggagcaccgcgacgcg
gccttcctgtcctacgagctggcgaccatcaagtgcgatgtcgagctggatgtcgaagtg
gacgccctggtctgcggtgaaccggaccgcgaggcgctgctggcgctgtacaccgagatg
gagttcaagagctgggtggccgaggtccagcgcagtgcgccccaggctggtggcagcgtt
gctgccgacgttgaacctgtggccgagaaggtcgagccgaagtacgagaccatcctcgac
caggcgcgtttcgacgcctggctggagaagctgcgccaggcgccgctgttcgccttcgac
accgagaccaccggcctcgacgcgcagcaggcgcaactcgttggcctgtcgttcgccgtc
gagccccacgaggccgcctatgtaccgctggcccacgattatgaaggcgcccccgcccag
ctcgaccgtgacgccgtgctgctggccctgaagcccctgctggaagacccggccaagggc
aagatcggccagaacgccaagtacgacatcaacatcctggccaacggcagcccggccatc
ctgatgcgcggcgtggcctacgacaccatgctcgagtcctatgtgctcgactccaccgcc
acccgtcacgacatggacagcctggcgcagaagtacctggaccacaccaccatcggtttc
gaggacatcgccggcaagggcgccaagcaactgaccttcaaccagatccccctggaaaag
gccggcccctacgcggccgaggacgccgacatcaccctgcgcctgcaccacgcgttgcag
gcgcgcttggccaagacgccgagcgtgctgccggtgctgatggacatcgagatgccgctg
gtgccggtgctggcgaagatcgagcgccagggcgcgctggtcgacgccgcgctgctcggc
gtgcagagcggcgagctgggggcgaagctggtggagcttgagcgagaggcatacgccctg
gccggcgaggagttcaacctgggctcgcccaagcagttgggcgcgatcctctacgacaag
ctgggcatgccggtgctgagcaagaccgccaagggccagccgtccaccgccgaggcggtc
ctggatgacctggccgagcagggctacccgctgcccaaggtgctcatgcagtaccgcagc
ctgagcaagctcaagagcacctacaccgacaagctgccggggcagatcaacccgcgcacc
gggcggatccacacttcctaccagcaggccgtggccgccaccggccggctgtcgtccagc
gacccgaacctgcagaacatcccggtgcgcaccgccgaaggccggcgcattcgccaggcc
ttcgtcgccagccccggctacaaactgctggcggcggactattcgcagatcgagttgcgc
atcatggctcatctggccaaggacgagggcctgctgcatgccttccgcaacgacctggac
gtgcaccgtgccaccgccgccgaagtgttcggcgtggccctggcggacgtcaccagcgac
cagcgccgcagcgccaaggcgatcaacttcggcctgatctatggcatgagcgcgttcggc
ctggccaagcagatcggcgtcgaccgcaagcagtcccaggactacatcgaccgctacttc
gcccgttatcccggcgttctggcctacatggagcgcacccgcgcccaggccgccgagcaa
ggtttcgtcgagaccctgttcggccgccgcctgtacctgccggacatcaacgccaagaac
ccggccctgcgcaaaggcgccgagcgcaccgcgatcaatgccccgatgcagggcaccgcg
gcggacatcatcaagcgtgccatggtggcggtggataactggctgaccgacagcaagctg
gatgcgcgagtgatcctgcaggtacacgacgaactggtgctcgaggtgcgcgaggacctg
gtcgagcaggtgaaagatgaaattcgtggctacatgagcggtgccgcggaactcgatgtg
ccgctgctggttgaagtgggcgttggctcgaattgggacgaagctcactaa
DBGET
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