Pseudomonas mosselii: CLJ08_13880
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Entry
CLJ08_13880 CDS
T07806
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJ08_13880 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmol03021
]
CLJ08_13880 (rho)
03019 Messenger RNA biogenesis [BR:
pmol03019
]
CLJ08_13880 (rho)
Transcription machinery [BR:
pmol03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLJ08_13880 (rho)
Messenger RNA biogenesis [BR:
pmol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLJ08_13880 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
Motif
Other DBs
NCBI-ProteinID:
ATB65661
UniProt:
A0A135NMX8
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All DBs
Position
2981586..2982845
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AA seq
419 aa
AA seq
DB search
MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NKSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgacagaactcaagcaaaagccgattaccgatcttttggaaatggccgaacag
atgggcatcgaaaacatggcccgttcgcgcaaacaggacgtgattttcgccctgctgaaa
aagcatgcgaaaagcggcgaagagatctcgggtgacggcgtgctggagattctccaggat
ggtttcggtttcctgcgttcggcggatgcctcttacctggccggccctgacgacatctac
gtttcgcccagccagatccgtcgcttcaacctgcgcaccggcgacaccatcgtcggcaag
atccgtccaccgaaggaaggcgagcgttacttcgcgctgctgaaggtcgataccatcaac
ttcgaccgtccggagaacgcgaagaacaagattctcttcgaaaacctgacgccgctgttc
cccaacaagcgcctgaagatggaagccggcaacggttccaccgaagacctcaccggtcgc
gtcatcgacctgtgcgccccgatcggcaaaggccagcgcggcctgatcgtcgccccgccg
aaagcgggcaagaccatcatgctgcagaacatcgcggccaacatcacccgtaacaacccc
gagtgccacctgatcgtcctgctgatcgacgagcgcccggaagaagtgaccgagatgcag
cgtaccgtgcgcggcgaagtggtcgcctcgaccttcgacgagccgccgacccgccacgtg
caggtcgccgaaatggtcatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtcatcctgctcgattcgatcacccgtctggcccgtgcctacaacaccgtgatcccgagc
tccggcaaggtgctgaccggtggtgtcgacgcccacgccctggagaagccgaagcgtttc
ttcggtgccgcgcgtaacatcgaggaaggtggttcgctgaccatcatcgccaccgcgctg
gtcgagaccggctcgaagatggacgaagtgatctacgaagagttcaagggtaccggcaac
atggagctgcccctggaccgtcgtatcgccgagaagcgtgtgttcccggccatcaacatc
aacaagtccggtacccgccgcgaagagctgctgaccgccgacgacgaactgcagcgcatg
tggatcctgcgcaagctgctgcacccgatggacgagatcgccgccatcgagttcctggtc
gacaagctcaagcagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaa
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