Pseudomonas mosselii: CLJ08_14235
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Entry
CLJ08_14235 CDS
T07806
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
pmol
Pseudomonas mosselii
Pathway
pmol02025
Biofilm formation - Pseudomonas aeruginosa
pmol03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CLJ08_14235 (icmF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CLJ08_14235 (icmF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pmol02044
]
CLJ08_14235 (icmF)
Secretion system [BR:
pmol02044
]
Type VI secretion system
Imp/Vas secretion system core components
CLJ08_14235 (icmF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
Motif
Other DBs
NCBI-ProteinID:
ATB65731
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Position
3061356..3064862
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AA seq
1168 aa
AA seq
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MKAFFSFVIRWVVPVLGLLALSLIIWFLGPLLDALVPVAPRLVLIVLLFAVWIAYRVWRI
VQARRQAAKVMQSLAAETAPDPAGVATAEELATLRQRMDEALMLLKKARLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSHAQVDKAAWLGFLDLLKSQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
TRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFPLDDGQHGDGP
LAQFGSEFALLEQRLNERLVERLQQERDPARRDLVYGFVQQFAALRGNLKTFLDGIFKPN
AFEARALLRGVYFTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQNGTGRSYFIEKLFSAV
AFAERGLVGSNPKVEQRRKWIARGALALSVALVLVVGTLWTLSYRANQQYIAEVDGRLKP
LGKSVQELSPAQRNVVDVLPLLNGVRRLAEDPPGWAEGLGLYQGDMLEGESDSVYRKLLI
AIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADGEHYDAEFIKAWVTLDWERSLPRD
LAPDLRQALEQHLAALFDKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPTGV
GDFRVSDAAGRDAALVFRFKNGKPLSEPLPGIFTVEGYRKAFLAASLAHSETLAEERWVL
GREASESGDAKRLADDVLQLYYQDYIRHWDALLADLDFVPITSVGQAADVLRVLSGPTSP
MKKLLQAVAKETNLAQPTTLDKVQAKAEQAGVDQLRQRLGGLLGDAPLPGDNPAAREVDP
VTAHFAELAALVETGEGQPAAIDGLLTDLNALYVQVSAMVGASGDALLGEAKNQAQAAAQ
RVALGAARQPKVVQNLVGSVLGSTHNIVMGGVRNQLNAAWTSEVVNVYRQSLSGRYPLVA
GSTRDATLEDFGLFFGVGGVMDNYFRKYLQPYVNTSSTPWSWQPGAAQKLGINSNVLYTF
QRAASIRDAFFRNSNGVQPGVRFELKPVAMDATITQFLLDLDGQQVSYDHGPSRPVALQW
PNPNSIGVVRLSISPPSATGRSGLTVEGPWAWFRLLDQSDLVAGSSPERFNLRLRVDGAS
VSYELRASSAFNPFRSRVLSGFSLPEHL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttgtcattcgctgggtggtcccggtgctgggcctgctcgcc
ctcagcctgatcatctggttcctcggtccgctgcttgatgcgctggtgcccgtcgcgccg
cgcctggtgctgatcgtcctgctgttcgcggtgtggatcgcctaccgcgtgtggcgcatc
gtccaggcccggcgccaggcggccaaggtgatgcagagcctggctgccgagaccgcgccg
gatcctgccggcgttgccaccgccgaagagctggcgaccctgcgccagcgcatggacgag
gccctgatgctgctgaagaaggcgcgcctgggcggtgacgagcgacgcaacctgtacgag
ctgccgtggtacgtgatcatcggcccacccggttcgggcaagaccaccgcgctggtcaac
tccggcctgcatttcccgctggcggcgcagttgggtgagggcgccatccgtggcgtgggc
ggtacgcgcaactgcgactggtggttcaccgaccaggccgtgctgctggacaccgccggc
cgctacaccacccaggacagccatgcccaggtggacaaggcggcctggctgggcttcctc
gacctgctcaagagccagcgttcgcgccggcccatcgacggcgccttcatcgccatcagc
ctgtccgacctgctgctgggcagcgacgccgagcgcgccgcccacgcggcggcgatccgc
acccgcatccaggagttgtacagccagctgggcgtgcgtttcccgatctacctgatgctg
accaagctcgatctggtgccgggcttcatggagttcttcgacaacctgagcaaggaagag
cgcgcgcaggtgtggggcatgaccttccccctggatgacggccagcacggcgatggcccg
ctggcccagttcggcagtgagttcgccctgctcgagcagcgtctcaacgagcgtctggtg
gagcgcctgcaacaggaacgcgacccggcgcggcgcgatctggtctacggcttcgtccag
cagttcgctgccttgcgcggcaatctcaagaccttcctcgacggcatcttcaagcccaac
gccttcgaagcacgcgccctgttgcgcggcgtgtacttcaccagcggcacccaggaaggc
agccccatcgaccgtctgatcggcagcatggcccagagcatgggcctggaccgtgcccac
ctggcgcggcagaacggcaccgggcgcagctacttcatcgagaagctgttcagcgccgtg
gccttcgccgagcgcggcctggttggcagcaaccccaaggtcgagcagcggcgcaagtgg
atcgcccgcggtgccctggccctgagcgtggccctggtgctggtggtcggcaccttgtgg
accctgagctaccgcgccaaccagcaatacatcgccgaggtcgacggccgcctcaaacca
ctgggcaagagcgtgcaggaactgagcccggcacagcgcaacgtggtcgacgtgctgccc
ttgctcaacggcgtgcgccgcctggccgaggatccgcccggctgggccgaaggcctcggg
ttgtaccagggcgacatgctcgaaggcgaatcggacagcgtctaccgcaagctgctgatc
gccatcttcgccccgcgcctggttacccgcatcgaggagcaactgtacgccggcggcccg
tccgactacctctacgaggggctcaaggcctacctgatgctggccgacggcgaacactac
gacgccgagttcatcaaggcctgggtcaccctcgactgggaacgcagcctgccccgcgac
ctggcgccggacctgcgccaggccctggagcagcacctggcggcgctgttcgacaagcga
ccgcccaatgcccgtctcgaccagcgcctgatcgacgacacccgtcgccagctgcaacag
ctgccggtggcccagcgcgtctacgaccgggtcaaacgccagaaactgccgaccggggtc
ggcgacttccgggtcagcgacgccgccggccgcgatgccgcgctggtgttccgcttcaag
aacggcaagccgttgagcgagccgctgccgggcatcttcaccgtcgagggctaccgcaag
gcgttccttgccgccagcctggcccacagcgagaccctggccgaggagcgctgggtgctg
ggccgcgaggccagcgagtcgggcgatgccaagcgcctggccgacgatgtgctgcagctg
tactaccaggattacatccgccattgggatgcgctgctggcggacctggacttcgtgccg
atcaccagcgtcggccaggccgccgatgtgctgcgggtactgtccgggccgacctcgccg
atgaagaagctgctgcaggcggtcgccaaggagaccaacctggcgcagccgaccaccctc
gacaaggtccaggccaaggccgagcaggccggtgtcgaccagttgcgccagcgcctcggc
ggcctgctcggcgatgcgccgctgcccggcgacaacccggctgcccgtgaggtggacccg
gtgaccgcgcacttcgccgagctggccgcgctggtggaaaccggcgaaggacaacctgcg
gccatcgatggcctgctcaccgacctcaatgccctgtacgtgcaggtcagcgccatggtc
ggcgccagcggcgacgcgctgctgggggaggccaagaaccaggcccaggccgccgcgcag
cgtgtcgccctgggcgccgcgcgccagcccaaggtggtgcagaacctggtggggtcggtg
ctcggctcgacccacaacatcgtcatgggcggcgtgcgcaaccagctcaacgccgcctgg
accagcgaggtggtgaacgtctaccgccagtccctcagcggccgttacccgctggtggcc
ggcagcacgcgggacgccaccctggaggacttcggcctgttcttcggtgtcggcggggtg
atggacaactacttccgcaagtacctgcaaccctacgtcaacacctcgagcacgccgtgg
agctggcagccgggcgcggcgcagaagctggggatcaacagcaacgtgctgtacaccttc
cagcgcgcggcgagcattcgtgatgcgttcttccgcaacagcaacggcgtgcagccgggc
gtgcgcttcgaactcaagccggtggcgatggacgcgaccatcacccagttcctgctcgac
ctcgatggccagcaggtcagctacgaccacggtccgagccggccggtggcgttgcagtgg
ccgaaccccaacagcatcggcgtggtgcgcctgtcgatctcgccgccctcggccaccggc
cgttccggcctgaccgtggaaggcccctgggcctggttccgcctgctcgaccagtccgac
ctggtggccggcagctcgccggaacgcttcaacctgcgcctgcgcgtcgatggtgccagc
gtgtcctacgagctgcgtgccagcagcgccttcaacccgttccgcagccgagtgctcagc
ggtttcagcctgccggagcacctgtga
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