Pseudomonas mosselii: CLJ08_14335
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Entry
CLJ08_14335 CDS
T07806
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLJ08_14335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmol03400
]
CLJ08_14335
Enzymes [BR:
pmol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CLJ08_14335
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLJ08_14335
DNA repair and recombination proteins [BR:
pmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLJ08_14335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
ATB65751
UniProt:
A0A290H3J8
LinkDB
All DBs
Position
3088635..3089447
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVSVERRAKYL
LINAEVGTLISHLGMSGNLRLVELGLPAAKHEHVDIELESGLMLRYTDPRRFGAMLWSVD
PLNHELLIRLGPEPLTELFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGGISRARYLKLAIEIKRVLAAAIEQGGTTLRDFIGGDGQPGYFQQELFVYGR
GGQPCKVCGTELREVKLGQRASVFCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccagaggtcgagacgacgcggcgcggcatcgcgccccatctggagggg
cagcgggtcagccgcgtggtggtgcgcgaccggcgcctgcgctggccgatcccggaagac
ctcgacgtgcgcctgtcggggcagcgtatcgtcagcgtcgagcgccgcgccaagtacctg
ctgatcaacgctgaggtcggcaccttgatcagccacctgggtatgtcgggcaacctgcgc
ctggtcgaactgggcttgccggcggccaagcacgagcatgtggatattgagctcgagtcg
gggctgatgctgcgctataccgacccgcgccgtttcggggccatgctctggagcgtcgat
ccgctcaaccatgaactgctgattcgcctggggccggagccgctgaccgagctgttcgac
ggcgagcggctgttccagctgtcccgggggcgctcgatggcggtcaagccgttcatcatg
gacaacgccgtggtggtgggcgtgggcaacatctacgccaccgaagcactgttcgccgcc
gggatcgacccgcgccgcgaggcaggcgggatctcccgggcgcgctacctgaagctggcg
atcgagatcaagcgggtgctggcggcggccatcgagcagggcgggaccaccttgcgcgac
ttcatcggaggcgatgggcagccggggtacttccagcaggaactgttcgtctatggacgc
ggtggtcagccgtgcaaggtgtgtggtaccgagttgcgtgaagtgaagctggggcagcgg
gcgagcgtgttctgcccgaaatgccagcgttga
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