Pseudomonas mosselii: CLJ08_15440
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Entry
CLJ08_15440 CDS
T07806
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLJ08_15440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmol03021
]
CLJ08_15440
03400 DNA repair and recombination proteins [BR:
pmol03400
]
CLJ08_15440
Enzymes [BR:
pmol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLJ08_15440
Transcription machinery [BR:
pmol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLJ08_15440
DNA repair and recombination proteins [BR:
pmol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLJ08_15440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
ATB65954
LinkDB
All DBs
Position
3317002..3318003
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQTDEDESRSIGRLQLDASFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagtttctgacaccccgtcacatcgacgtgcaggttgtcagt
ccaacccgcgccaagatcacgctcgagcctctcgagcgtggcttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgacggcgtactccatgagtactccgcgatcgaaggtgttcaggaagacgtcattgaa
atcctgttgaacctgaaaggcctggctatcaaactgcacggtcgtgacgaagttacgctg
accttgtcgaaaaagggttcgggggtggttaccgctgccgatattcagctggatcacgat
gtcgagatcgtcaaccccgatcacgtaatcgcgaacctggcgtccaacggcgccctgaac
atgaagctcaccgtagctcgtggtcgcggttacgagccggccgactcccgtcagactgac
gaagacgaaagccgcagcattggccgcctccagctggacgcttcgttcagcccggtgcgt
cgtatcgcctacgtggtcgagaacgcccgtgttgaacagcgtaccaacctggacaagctg
gtcatcgatctggaaaccaacggtactctggatcctgaagaggctatccgtcgtgccgcg
accatcctgcaacagcagctggccgcgttcgtcgacctcaaaggtgacagcgagccggtt
gtggtcgagcaggaagacgagatcgatccgatcctgctgcgcccggttgacgacctggaa
ctgaccgtacgttcggccaactgcctcaaggcggagaacatctactacatcggcgacctg
attcagcgtaccgaagtagagctgttgaagactcctaacctgggcaagaagtccctgact
gaaatcaaggacgtcctggcctcccgtggtctttccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaagacgacaaggcgactgcctga
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