Pseudomonas mosselii: CLJ08_17520
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Entry
CLJ08_17520 CDS
T07806
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmol
Pseudomonas mosselii
Pathway
pmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLJ08_17520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmol03019
]
CLJ08_17520
Enzymes [BR:
pmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CLJ08_17520
Messenger RNA biogenesis [BR:
pmol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLJ08_17520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
MSA-2c
Motif
Other DBs
NCBI-ProteinID:
ATB66324
LinkDB
All DBs
Position
complement(3771467..3772933)
Genome browser
AA seq
488 aa
AA seq
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MLKALKKIFAKGDAAPQAAEPVAVTPAAPTAQPPVEKAPARQHAKPRAAAKPQAEPQPAH
QPRAEQPARDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLGFP
YCTPIQAQVLGHTLRGQDAIGRAQTGTGKTAAFLISIISQLQQVPPPKERYMGEPRALII
APTRELVVQIAKDAQALTKYSGLNVMSFVGGMDFDKQLKSLEARHCDILVATPGRLLDFN
QRGEVHLDMVEVLVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLA
KQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKDEV
RRIEEKLVRDGINAAQLSGDVPQHKRIRTLENFREGRISVLVATDVAGRGIHIDGISHVI
NFTLPEDPDDYVHRIGRTGRAGSSGVSISFAGEDDSYQLPAIETLLGRKIKCEMPPDELL
KPVPRKHH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcgccaagggagacgccgcgccgcaggccgccgag
cccgtcgccgtgaccccggccgcgccgaccgcgcaaccgcctgtcgaaaaggcgccagcg
cgccagcacgccaagcccagggccgcggcaaaaccacaggccgaaccccaacccgcccac
cagccgcgcgccgaacagcccgcccgggacaagccgcgccgcgaacgcaagcccaagccc
caggccagcctgtggaaacccgaggacttcgtggtcgagccgcaggaaggcaagacccgc
ttccacgacttcaagctctccaacgagctgatgcacgccatccacgaccttggcttcccc
tactgcacgccgatccaggcccaggtcctgggccacaccctgcgtggccaggacgccatc
ggccgggcccagaccggcaccggcaagactgccgcgttcctgatctcgatcatctcgcag
ctgcagcaggtgccgccgcccaaggagcgctacatgggcgagccgcgggcgctgatcatc
gccccgacccgcgagctggtggtgcagatcgccaaggatgcccaggccctgaccaagtac
agcggcctgaacgtgatgagtttcgtcggcggcatggacttcgacaagcagctgaaatcg
ctggaagcccgccactgcgacatcctggtggccacccccggccgcctgctggacttcaac
cagcgcggcgaggtgcacctggacatggtcgaggtgctggtgctggacgaggccgaccgc
atgctcgacatgggcttcatcccccaggtccgccagatcatccgccagaccccgcccaag
agcgaacgccagaccctgctgttctccgccaccttcaccgacgacgtgatgaacctggcc
aagcagtggaccaccaacccggccatcgtcgagatcgagccggagaacgtggccagcgag
accgtcgagcagcacgtctatgccgtggctggcagcgacaagtacaagctgctgtacaac
ctggtcacgcagaacaagtgggaacgggtgatggtgttcgccaaccgcaaggacgaggtg
cggcgcatcgaggaaaaactggtgcgcgacggcatcaacgccgcccagctgtcgggcgac
gtgccgcagcacaagcgcatccgcaccctggagaacttccgcgaagggcgcatcagcgtg
ctggtggccaccgacgtggccggccgcggcatccatatcgacggcatcagccacgtgatc
aacttcaccctgccggaagatccggatgactacgtgcaccgtatcggtcgtaccggtcgt
gcgggcagcagcggggtatcgatcagctttgccggtgaggacgattcgtaccagctgccg
gcgatcgagacgctgctggggcgcaagatcaagtgcgagatgccgccggacgagctgttg
aagccggtgccacgcaagcatcactga
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