Pseudomonas monteilii SB3078: X969_18920
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Entry
X969_18920 CDS
T02972
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pmon
Pseudomonas monteilii SB3078
Brite
KEGG Orthology (KO) [BR:
pmon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmon03009
]
X969_18920
Enzymes [BR:
pmon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X969_18920
Ribosome biogenesis [BR:
pmon03009
]
Prokaryotic type
rRNA helicases
X969_18920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
ERCC3_RAD25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHC83930
LinkDB
All DBs
Position
complement(3977104..3978426)
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AA seq
440 aa
AA seq
DB search
MFSQFALHERLLKAVAELNFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPLLN
RLVDLRERRVEIRALILLPTRELAQQTLKQVQLFSQFTYIKSGLVTGGEDFKEQAAMLRK
VPDVLIGTPGRLLEQLNAGNLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENRQQTL
LFSATTGGAALRDIIGKVLKDPEHLMLNSVSQLAEGTRQQIITADHDQHKEQIVQWLLAN
ETFDKAIIFTNTRALADRIYGHLVAKDVKAFVLHGEKDQKDRKLALDRFKQGSSKVLVAT
DVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMSSIER
YLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTGDKKAAAKRKPTAKPKAN
APLASADGLAPLKKRRPAAE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgttctcccaattcgccctgcatgaacgcctgcttaaagccgtggccgagcttaacttt
gtcgagccaaccccggtgcaggccgcggccatccccctggccctgcaagggcgtgacctg
cgcgtgaccgcgcagaccggcagcggcaagaccgcggccttcgtgctgccgctgctcaac
cgcctggtcgacctgcgcgaacgccgcgtcgagatccgcgcgctgatcctgctgccgacc
cgtgagctggcccagcagaccctcaagcaggtacagctgttctcgcagttcacctacatc
aagtcgggcctggttaccggcggtgaagacttcaaggaacaggccgccatgctgcgcaag
gtgccggacgtgctgatcggcaccccgggccgcctgctcgagcagctcaatgccggcaac
ctcgacctgtcccacgtgcaggtgctgatcctcgacgaagccgaccgcatgctcgacatg
ggctttgccgaggacatggagcgcctgtgcaaggagtgcgagaaccgccagcagaccctg
ctgttctccgccaccaccggtggtgcggccctgcgcgacatcatcggcaaggtgctgaaa
gacccagagcacctgatgctcaacagcgtctcgcagttggccgaaggcacccgccagcag
atcatcaccgccgaccacgaccagcacaaagagcagatcgtgcagtggctgctggccaac
gaaaccttcgacaaggcgatcatcttcaccaacacccgcgcgctggccgaccgcatctac
ggccacctggtggccaaggacgtgaaggccttcgtgctgcacggcgagaaggaccagaag
gaccgcaagctggccctggaccgcttcaagcagggcagctccaaggtgctggtggctacc
gacgttgcggcccgtggcctggacatcgacggcctggacctggtgatcaacttcgacatg
ccgcgcagcggtgacgagtacgtgcaccgcgtgggccgtaccggccgtgccggtggcgaa
ggcctggcgatctcgctgatcacccacaacgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagcagttcgagcgccgggtgatcaaggaagtgaagggcacctacaacggg
cctaagaaggtcaaggcctcgggcaaggcggctggcagcaagaagaaaaaggtcgagaag
aagaccggtgacaagaaggcggccgccaagcgcaagccaaccgccaagccgaaggccaat
gcaccgctggccagcgctgacggcctggcgccgctgaagaagcgcaggcctgcggctgag
taa
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