Pseudomonas monteilii SB3078: X969_22260
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Entry
X969_22260 CDS
T02972
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmon
Pseudomonas monteilii SB3078
Pathway
pmon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
X969_22260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmon03400
]
X969_22260
Enzymes [BR:
pmon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
X969_22260
DNA repair and recombination proteins [BR:
pmon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
X969_22260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AHC84563
LinkDB
All DBs
Position
complement(4728801..4732283)
Genome browser
AA seq
1160 aa
AA seq
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MPNTTHLHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPQDDDQGGCGIAAAIDVQLPGSFMWQLYRSVLGRDEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGEHVLNTARAE
RKALPPGNRWQAELWRALLEDVGEQGMAQSRAGVHQRFIERINSLEQAPAGLPARVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPLQL
DDQSLHQHAHPLLAAWGKQGRDYINLLDSYDDPSSYQGVFSDGRIDLFSEGSPTTLLNQL
QDDILELRPLAETREQWHPVDPAKDRSIRFHIAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMLPAIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGREPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRARFGIRENDLPTLHRWIEGAGIRWGLNAEQRASLGLPAGLEQNS
WRFGLRRMLLGYAVGVGEACDGIEPYDEIGGLDAALIGPLVALLDALEVASKALSEPATV
SQWGERLHALLQVFFLAEGERDEFLLMQLQDLRDSWLEVCEAVGLQDPLPLTVVREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQQPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPASVLIGQLRDHLAAGWQLAG
AEQGQPAEPGEQLLHALTQEHPLQPFSSRYFQKGSPLFSFAHEWQVLHQQGQEDQQADPV
LPPYHDEEALSLTQLNDFLRHPVRHFFSQRLKVYFEALEAPTPDEEPFVLDILQRYGASE
SLLGAALAEPDNAEQALQAQARRLQACGVLPLAGFGELLQRELIEPLPGLLQRHRQLLQR
WPQLVEGALPVHFEHGPHRLEGWLGRVFQADDQSLLSITTVPNTISAGRNALKWHRLIAP
WVTHLAACAAGYPYNSALVASDLTLLLEPLPQAQAAQLLGDLLVARQAAMNAPLPVAAKT
AFAWLAQDDSDKALAAAARAYEGDERTSFGERSESIALARQFRDFAALTADETFEGWCEA
LYRPLFNAPWQTLGNPEKGA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcccaataccactcacctccaccctggcttcatgatcgtccacggcaaccgcctcgac
gacctgcgcagcttggtggtgagctggatgcgtcgctatcccttggcacctctggaaaac
gaaatcgccttggtgcaaagcaatggcatcgcccaatggctcaagctggctcttgccgaa
gaccctcaggacgatgaccagggcggctgtggcatcgccgccgccatcgatgtgcaactg
ccaggcagcttcatgtggcagctttaccgcagcgtgctgggccgtgacgaaattcccgaa
gtctccctgctcgacaaggcaccgctgacctggcgtctgatgcgtctgctcccggctttg
atcgaacgtcctcacttcgaaccgctgcgacgcttcctcaccgacgacagcgacctgcgc
aagcgctatcagctcgccgagcgcctggccgacctgttcgaccagtatcaggtctaccgc
gccgactggctcaaggattgggccgctggcgagcacgtcctcaacaccgcccgcgctgaa
cgcaaggcgctgcccccgggcaaccgctggcaggccgagttgtggcgtgcattgctggag
gatgttggtgagcagggcatggcgcagagccgtgccggcgtacatcaacgcttcatcgaa
cggatcaatagcctggagcaggcacctgccggtctgccggcccgggtgatcgtattcggt
atctcatcgctgccagcccaggccctcgaggcactggccggcctggcacgcttcagccag
gtgctactgtgcgtgcacaacccctgccgccaccactgggccgatatcgttgccgacaag
gacctgctgcgccaccagtacaagcgccagcagcgcaagcagggcatgcccttgcaactg
gacgaccagtcgctgcaccagcatgcccaccctttgctggccgcctggggcaaacaaggc
cgcgattacatcaacctgctcgacagctacgatgaccccagcagttaccagggcgtgttc
agcgacggtcgcatcgacctattcagtgagggctcgcccaccacgctgctcaaccagttg
caggacgacatccttgaactgcgtccgctcgccgaaactcgtgagcagtggcatccagtc
gacccagcgaaggaccgctcgatccgcttccacatcgcccatagcccgcaacgcgaagtg
gagatccttcacgatcagttactggcccggttcagcgcagacccaaccctgcgcccacgt
gacgtgatcgtcatgctgccggccatcgatacctacgcgccgcatattcgcgccgtattc
ggccagttgcagcgcaacgatccgcgctacatcccgttcaccctgaccgaccagggccaa
cgtggccgcgaacccttgctgattgccctcgaacacctgctcaagctgccggacagccgc
ttcgcggtcagcgaagtgctcgacctgctggatgtgccggcagtccgcgcccgtttcggc
atacgcgaaaacgacctgcccacgctgcaccgctggatcgagggggccggcatccgctgg
ggcctcaatgccgagcagcgggccagcctgggcttgcccgctgggctggaacagaacagc
tggcggttcggcctgcggcgcatgctgctgggttatgccgtcggcgtgggtgaggcctgt
gacggcatcgaaccctacgatgaaatcggtggcctggatgcggcgctgatcggcccgctg
gtcgccttgctcgacgccctcgaagtagccagcaaggccttgtccgagcctgccactgtc
agccagtggggggaacgcctgcatgccttgctgcaagtgtttttcctggccgagggcgag
cgcgacgagttcctgctgatgcagttgcaggatttgcgtgatagctggcttgaggtgtgc
gaggccgtcggcctgcaagacccattgccgctgaccgtggtgcgcgaagcctggctgtcg
ggcctcgaccagggcaagttgtcccagcgcttcctcgccggctcggtgaacttctgtacc
ctcatgccgatgcgcgccatcccgttccgggtggtctgcctgctgggcatgaacgatggc
gattacccccgcgctcagcagccgctggacttcgacctgatggccagcgactaccgcccc
ggtgaccgctcgcgccgcgaggatgaccgctacctgctgctcgaagcattgttgtcggcc
cgcgaccagctgtatgtcagctgggtcgggcgcagcattcgcgacaacagcgaacgcccg
gcctcggtgctcatcggccagttgcgcgatcaccttgcagccggctggcagctggcaggc
gcggagcaggggcagccggcagaaccgggcgagcaactgctgcacgcactgacccaggag
cacccgctgcaaccgttcagttcacgctacttccagaagggcagcccgctgttcagcttt
gcccacgaatggcaggtgttgcaccagcagggccaggaggaccagcaggctgaccccgtc
ctgccgccataccatgacgaggaggccttgagcctgacccagctgaatgacttcctgcgc
cacccggtgcggcatttcttcagccagcgtctgaaggtgtacttcgaagcgctggaagca
ccgaccccggacgaggaacccttcgtcctcgatatcctgcaacgatacggcgccagtgaa
agcctgttgggtgcagcgctggccgagccggacaatgccgaacaggccctgcaggcacaa
gcacggcgcttgcaggcctgtggcgtgctgccactggccggcttcggcgaactgctgcag
cgcgagctgatcgagccccttccaggcctgctgcaacgccaccgccagctattgcaacgc
tggccgcagctggtcgagggggcattgccagtgcatttcgagcacggcccgcaccgcctc
gaagggtggcttgggcgggtattccaggcagatgaccagagcctgctcagcatcaccacc
gtacccaacactatcagtgccgggcgtaacgccctcaagtggcaccgactgatcgcgccc
tgggtcacgcacctggcggcctgcgcggcgggctacccgtataacagcgcgctggtggcc
agcgacttgaccctactgcttgagccactgccgcaagcgcaggcggcgcaattgctgggc
gacctgctggtagcccgtcaggcggcgatgaatgcgccgttgccggtcgcggccaagacc
gcgttcgcctggctggcccaggacgatagcgacaaagccctggctgctgccgcccgcgcc
tacgaaggcgatgagcgcaccagcttcggcgagcgcagtgaaagcatcgccctggcccgg
cagttccgcgactttgccgcactcaccgctgatgaaaccttcgaaggctggtgcgaagcc
ttgtaccgcccattgttcaacgccccgtggcagaccctgggcaacccggagaaaggcgca
tga
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