Pseudomonas monteilii SB3078: X969_23435
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Entry
X969_23435 CDS
T02972
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pmon
Pseudomonas monteilii SB3078
Pathway
pmon03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmon00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
X969_23435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmon03019
]
X969_23435
03009 Ribosome biogenesis [BR:
pmon03009
]
X969_23435
Messenger RNA biogenesis [BR:
pmon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X969_23435
Ribosome biogenesis [BR:
pmon03009
]
Eukaryotic type
Pre-60S particles
RNases
X969_23435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHC84787
LinkDB
All DBs
Position
complement(4982952..4983494)
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVDMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgacgtcatcatcgagatggccaccatcgtcaccgacagcgaactgaacaccctggcc
gaagggccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgagtgg
aacacccgcacccatggcgcttcgggcctgacccagcgcgttcgcgagagcaaggtcgac
atggccgaagccgaggcgcagaccattgccttcctcgagcagtgggtaccgaaaggcaag
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctaccggcacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctcgaccctgaaggagctggct
gcacgctgggcacctgatgtgcgtgatagcttcaagaagggcaacacccacctggcgctg
gacgacatccgcgaatcgatcgccgaactgcgccactatcgcgagcacttcatcaaggtg
tga
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