KEGG   Penaeus monodon (black tiger shrimp): 119569121
Entry
119569121         CDS       T08784                                 
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like
  KO
K07466  replication factor A1
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030  DNA replication
pmoo03420  Nucleotide excision repair
pmoo03430  Mismatch repair
pmoo03440  Homologous recombination
pmoo03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119569121
   03420 Nucleotide excision repair
    119569121
   03430 Mismatch repair
    119569121
   03440 Homologous recombination
    119569121
   03460 Fanconi anemia pathway
    119569121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmoo03000]
    119569121
   03032 DNA replication proteins [BR:pmoo03032]
    119569121
   03400 DNA repair and recombination proteins [BR:pmoo03400]
    119569121
Transcription factors [BR:pmoo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    119569121
DNA replication proteins [BR:pmoo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    119569121
DNA repair and recombination proteins [BR:pmoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     119569121
   MMR (mismatch excision repair)
     119569121
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     119569121
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 zf-AN1
Other DBs
NCBI-GeneID: 119569121
NCBI-ProteinID: XP_037773353
LinkDB
Position
Unknown
AA seq 336 aa
MSFVTPCHEASDIPSMQFXFVPLDQLESLEKDTIIDIIGVCKDAMEVASITSKASGKELR
KRDVQVVDDTIERXVRLTLWGRQAENFDGTQQPVLAVKGAKLSDFNGRSLSLLSSSTLQI
NPDIREAHKLKGWFDNGGNTAETVNLSNQRGGGSAGMGSNFKTFGEAKLENLGSGDQADY
YTTKASVVLIRKENCLYSACPSDGCNKKVVDMNNGLYRCEKCNREYDSFNWRLMLSANLA
DISDNQWVTVFQDQAEMLLGTTSSELGFMRENNPDNFQNIFTDAAFKNFSFKLRVKMETY
NDESRLKTTVVACSPLEPREYNRRLISEIKQMSGQA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgtcatttgtcactccctgccatgaagctagtgacattcccagcatgcagttcnaattt
gtccctctggatcagctagagtctctggagaaagacaccatcattgatattattggtgtg
tgcaaggatgctatggaagtagcctctattacatcaaaggcctctggcaaagaattaagg
aagagagatgtgcaggtagttgatgatacaatagagaggtaagtacgtcttaccctttgg
ggacgtcaagcagaaaactttgatggaacacagcaacctgtgttggctgtgaagggtgca
aaattgtcagatttcaatggacgttctttgtctttgctgtcctcatcaacactacagatc
aacccagatatccgtgaggcccacaaattgaaggggtggtttgataatggaggcaacaca
gcagagacagtcaacctttccaatcagcgtggtggtggttcagcaggtatgggctccaac
ttcaagacatttggtgaggccaagctggagaacttgggtagtggagatcaagctgattat
tacaccacaaaggcttctgttgtgttgatacgcaaggagaactgtctttattcagcttgt
ccctcagatggttgcaacaagaaggtggtcgacatgaacaatggtctttacagatgtgag
aagtgtaaccgcgaatatgatagcttcaactggcgattgatgttgtctgccaaccttgct
gatatatcagacaatcaatgggtaacagttttccaagatcaggctgagatgctccttgga
accaccagctcagaactaggcttcatgcgagagaataacccagacaacttccaaaacatc
ttcacagacgcagctttcaagaacttttccttcaagcttcgtgtcaaaatggagacttac
aatgatgagagcagattgaagacgacagtagtagcctgcagcccccttgaaccaagagag
tacaaccgtcgccttatctcagaaattaaacagatgtcaggacaggcctaa

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