Penaeus monodon (black tiger shrimp): 119569122
Help
Entry
119569122 CDS
T08784
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
pmoo03440
Homologous recombination
pmoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119569122
03420 Nucleotide excision repair
119569122
03430 Mismatch repair
119569122
03440 Homologous recombination
119569122
03460 Fanconi anemia pathway
119569122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoo03000
]
119569122
03032 DNA replication proteins [BR:
pmoo03032
]
119569122
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119569122
Transcription factors [BR:
pmoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119569122
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119569122
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119569122
MMR (mismatch excision repair)
119569122
DSBR (double strand breaks repair)
HR (homologous recombination)
119569122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
119569122
NCBI-ProteinID:
XP_037773354
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSGLSNGVIVDITNGAHPEDPIVQILSMKRMPNGAQERFRILLSDGKWSSSFAMLATQLN
SKVASGEIANNCIIKMNRYVCNTVQNNKKVLIILDLTVVQTAEEVGGKIGEPVMFDPNKN
PQQEAAPAPRVTPLAAQTGDAPQRNPLAQRNVPNTTSSPARTPAGGNVHPISLLTPYQNK
WTIRARVTHKSDLRTWSNSRGEGKLFSMDLLDESGEIRATAFNEQVDKFMDMIEVNKVYY
ISGCTLKTANKQYSNLNNDYEMTFNKMTEVTPCHEASDIPSMQFNFVPLDQLESLEKDTI
IDIIGVCKDAMEVASITSKASGKELRKRDVQVVDDTNREVRLTLWGRQAENFDGTQQPVL
AVKGAKLSDFNGRSLSLLSSSHYRYFINPDIREAHKLKGWFDNGGNTAETVNLSNQRGGG
SAGMGSNFKTFGEAKLENLGSGDQADYYTTKASVVLIRKENCLYSACPSDGCNKKVVDMN
NGLYRCEKCNREYDSFNWRLMLSVSHLADISDNQWVTVFQDQAEMLLGTTSSELGFMREN
NPDNFQNIFTDAAFKNFSFKLRVKMETYNDESRLKTTVVACSPLEPREYNRRLISEIKQM
SGQA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtctcagcaacggcgtgattgtggatattaccaatggggctcacccagaagat
cccattgtgcagatcttgtccatgaaaaggatgccaaatggtgcccaggagcgcttccgc
atcttgctctccgatggcaaatggtcaagcagctttgccatgttggccacacagctcaat
agcaaggtggcaagtggagagattgcaaacaactgcatcatcaaaatgaacagatatgtt
tgcaacacggtgcagaacaataagaaggttttgatcattctggacctgaccgtagtgcaa
acagctgaggaagttggaggcaagattggagaaccagtaatgtttgaccctaataagaat
ccacagcaggaggctgctcctgcaccaagagtgacacctttagctgcccaaactggtgat
gcaccccaacgcaatcctttagcccagcgcaatgttccaaacacaacctcatctccagca
cgaactcctgcagggggtaatgttcaccccatcagcttgcttacaccttatcaaaacaag
tggaccatccgtgctcgtgtcacccataagtcagacctacgcacttggtcaaactctcgt
ggcgaaggaaagctcttctcgatggacctgttggatgagtctggagaaatcagagctact
gctttcaatgaacaagtggacaagttcatggatatgattgaggttaataaagtgtattac
atcagtggatgcacactgaaaacggccaacaaacagtactccaacctcaataatgattat
gagatgactttcaacaagatgacagaggtcactccctgccatgaagctagtgacattccc
agcatgcagttcaattttgtccctctggatcagctagagtctctggagaaagacaccatc
attgatattattggtgtgtgcaaggatgctatggaagtagcctctattacatcaaaggcc
tctggcaaagaattaaggaagagagatgtgcaggtagttgatgatacaaatagagaggta
cgtcttaccctttggggacgtcaagcagaaaactttgatggaacacagcaacccgtgttg
gctgtgaagggtgcaaaattgtcagatttcaatggacgttctttgtctttgctgtcctca
tcacactacaggtattttatcaacccagatatccgtgaggcccacaaattgaaggggtgg
tttgataatggaggcaacacagcagagacagtcaacctttccaatcagcgtggtggtggt
tcagcaggtatgggctccaacttcaagacatttggtgaggccaagctggagaacttgggt
agtggagatcaagctgattattacaccacaaaggcttctgttgtgttgatacgcaaggag
aactgtctttattcagcttgtccctcagatggttgcaacaagaaggtggtcgacatgaac
aatggtctttacagatgtgagaagtgtaaccgcgaatatgatagcttcaactggcgattg
atgttgtctgtgagccaccttgctgatatatcagacaatcaatgggtaacagttttccaa
gatcaggctgagatgctccttggaaccaccagctcagaactaggcttcatgcgagagaat
aacccagacaacttccaaaacatcttcacagacgcagctttcaagaacttttccttcaag
cttcgtgtcaaaatggagacttacaatgatgagagcagattgaagacgacagtagtagcc
tgcagcccccttgaaccaagagagtacaaccgtcgccttatctcagaaattaaacagatg
tcaggacaggcctaa
DBGET
integrated database retrieval system
