Penaeus monodon (black tiger shrimp): 119570093
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Entry
119570093 CDS
T08784
Name
(RefSeq) collagen alpha-1(XVIII) chain-like
Organism
pmoo
Penaeus monodon (black tiger shrimp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
119570093
NCBI-ProteinID:
XP_037773910
EnsemblRapid:
LOC119570093
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MNPGLNMPDFGSGAGEDFIPELEFSGSRRAPPTPPGQCVCNETSLVASILAQIPRGPPGE
DGKAGRDGMPGIPGTSGRPGPPGERGPIGGKGEKGDRGERGNPGPEGQQGAKGESGMDGA
PGMPGERGPQGPPGKPGWGNSRYDVDSGLAMAPARPGTPGTPGEKGAPGAPGIRGTRGYP
GAKGDRGESGLRGDKGDTGEPGRSGPAGPKGEPGSPGMNGAPGPPGFIGVPGDKGDKGER
GETGVGSPGPPGRPGGLTLEDHKAIVEQVLETLETKHGGVGVTIGSGINVWDTPGIPWSA
VSDDEDVYLEGSGGVEYKPFYPNQLKGFRGPPGPPGPPGLPGPQGIEGIQGLMGPPGDIG
PPGQPGLDGLPGARGAQGERGSPGPKGERGASGPGGEKGDRGAPGLPGPSGPVTTLIQPD
GTNVTVVKGAAGRPGPPGPPGLPGLGQKGERGQVGPPGPPGPPGPPAGGLLNSILGTSSS
DVAETSSRGTGGLPGPSGPPGPPGPPGAPGPPARSTGESDGGQMYVPVPGPPGPPGPPGP
PGLPGYTVEGPEGPRGPPGPPGHTVPGPPGASGPRGPPGYGQRGPPGPPGPPGPPASGDP
SSSSSIVPGAVTFPDKASLLKMSDMSPVGTLAFVMDEETLLVRVSAGWQYVAMGSVIPLP
TTTPEPATTPEPPVARPPPLQVDSLVNTVDGPRLRLAALNQPYTGDMHGVRGADYSCYRE
ARRAGLRGTFRAFLTSRVQNLDSIVRYSDRNLPVVNTKGEVLFNTWREIFSGTGGIFSQK
PRIFSFDGKEILTNSAWPQKYIWHGSDLLGERSLSSYCDAWNSESGDVVGLASSLLKNRL
LSQDRLGCHNSFAVLCIEATSQARYRRRRHVTSPEAEMSLEQYEQFLRGIDKVKEEN
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgggcttgaatatgccggatttcggttccggtgctggagaagacttcatcccc
gagctggaattcagcggaagtcgacgagcgccgcccacgccgcccggacagtgcgtgtgc
aatgagacgtcgttagtcgcctcaatcctcgcgcagatcccgcgcggcccccccggcgag
gacggcaaggcgggcagggacggcatgcccgggatccctggcacctccggacgcccaggg
cccccgggggagaggggccccataggaggcaagggcgagaagggcgaccgaggcgagcga
gggaatccgggacccgagggccagcagggcgcgaagggcgagtcgggcatggacggcgcc
cctgggatgcccggcgagagaggcccccagggacccccagggaagccaggctggggcaac
tccagatacgacgtggacagcggcctggccatggcaccggcgagacctggcacccctggc
actccgggcgagaaaggggcaccgggagcacctggcatccgcggcactcgagggtacccc
ggcgccaagggagacagaggcgaatccgggctgcgcggggacaagggagacacgggcgaa
ccgggaaggagcggcccggcaggacccaaaggagaaccaggatctcccggtatgaacggc
gcccccggtcccccaggcttcattggggtccctggtgacaagggcgataaaggtgaacga
ggtgaaacaggtgtcggttcgccaggtcccccaggtagaccaggggggcttacgctcgaa
gaccacaaggctattgtcgaacaggtgctggagactctggagaccaagcacggaggcgtt
ggagtcaccataggctctggtatcaacgtttgggacacccctggtataccctggagcgca
gtcagcgatgatgaagatgtctaccttgagggctcgggaggtgtggaatacaaacctttc
taccccaatcagctgaagggcttccgcggaccccccggaccccccggaccccctgggctg
ccgggaccccagggcatcgagggcatccagggcctgatgggacccccgggggacatcggg
cccccggggcagccggggctcgacggcctgccgggagcgaggggagcccagggcgagaga
ggatcccccggccccaagggagagcgaggcgcttcgggtcctggaggagagaagggagac
cgaggcgcccctggtctccccggcccgtcaggacctgtgacgacgctcatccaacccgac
gggaccaacgttaccgtcgtgaagggcgccgccggacgacctggcccacctggcccgccc
ggactgccaggtcttggccagaagggcgagcgaggccaagtagggccacccggacctcct
ggccctcccggcccccccgccggaggactcctcaacagcatcttgggcacaagcagcagc
gacgtcgccgagacctcctcgagaggcaccggcggcctcccgggtccctcgggtcctcca
ggtcccccggggcccccaggagccccaggacccccggccaggagcacgggggagagcgac
ggcggccagatgtacgtgcctgtgcccggcccccccggcccgccaggacctccgggacca
ccggggctgcctggctacaccgttgagggcccagagggaccccgtggcccgcctggccct
cctggacacaccgttcctggcccacccggagcgtctgggccaagaggtcccccgggatat
ggccagagaggacccccaggcccgcccggacccccaggacccccggccagtggagacccg
tcctcctcctcctccatcgtccccggcgccgtcaccttcccggacaaagcctcgctgttg
aagatgagcgacatgtctcccgtgggaaccctggccttcgtgatggacgaagagacgctg
ctggtccgagtctccgctggatggcagtacgtggcgatgggatcagtgattcctttaccc
acgaccacccccgagccagccacgaccccagagcccccagtggcgcggcctcctcccctg
caggtggactccctcgtcaacaccgtcgacggacccaggctgagactggccgccctcaac
cagccatacacgggagacatgcacggtgttcgaggggcggactactcctgctacagggag
gcgcgcagggcaggtctcaggggcactttcagggccttcctcacctccagggtacagaat
ttggactccatcgtgaggtactccgacagaaacttgccggtggttaatacgaagggagag
gtcctcttcaacacgtggcgagaaatattttcgggaacgggaggaatattctctcagaag
ccaaggatcttcagcttcgatggaaaggaaatcctgaccaattctgcctggccgcagaag
tacatctggcacggctccgacctcctcggcgagcgctccctctcctcgtattgcgacgcg
tggaacagcgagagcggcgacgtcgtgggtctcgcctcgtcgctcctgaagaaccggctc
ctgtcgcaggatcgcctcggctgccacaactcgttcgccgtcctgtgcatcgaagccact
agccaagcacggtatcggaggcggcgtcacgtgacctcgcccgaagctgaaatgagcctc
gagcagtacgagcagttcctccgggggatcgacaaggtgaaggaggagaactga
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