Penaeus monodon (black tiger shrimp): 119570620
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Entry
119570620 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119570620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119570620
03009 Ribosome biogenesis [BR:
pmoo03009
]
119570620
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119570620
Enzymes [BR:
pmoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119570620
Messenger RNA biogenesis [BR:
pmoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119570620
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
90S particles
RNase
119570620
Prokaryotic type
rRNA processing factors
119570620
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119570620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
119570620
NCBI-ProteinID:
XP_037774220
LinkDB
All DBs
Position
4:17071576..17104397
Genome browser
AA seq
1707 aa
AA seq
DB search
MSSGPSWAGGPACPQWPYVGPGNGPPPQWGASAGGMHQYPHNQPPPVNAPPQNWANAHGP
PPMYGAPNQGMPEAAPPDHYAVAPQTSMPNQYNVPQHSVPQGPPSGTPSGLPSNGHFGPP
PVRSCPGPVGIPQCPSVGTSGPLSLTQFPPPGPSPGPPPGPGYVGTPMYGWGVSPPPSSQ
MVQTGQPPPGSAWGGVSPGDIHHQTWQGSDWDSERPHRPHTEDLTTRSGIDRSGVPSRNS
YRGNSRGRDHDSSIHGQERSSQVSSRSGYEDDLCSIDSRYKENRSYSDAYSSNGWRDRHG
RRRKRSRSPSDYSSRRVESRNRTEPRRCSRDSRERSRYDNDRKERYSRSPGSHSRSSSRP
LSPERKRSRPSWSPDRHKSRSPVKEVGSXRKKRSAVDLPPEEKEECESLPTIQEEEKSKP
ASKEEELEEEEDVKAAWVRSAPADLYYQRDEKNPLVMRATKKLMSLCEVVEEKLIMRGTR
IREEKRKAREKKEQQEQHQAIACRNGCLSLKKDKTKEQDGETRESSAENNVPENSTGTKG
KESGEECNGITTKEAQEDVETANNSDIASLEVEIVKNPSSEGILCESVGVKCKHKHKHKH
RHINKENNDKDSEKGDSSSNSSSDSDSDNSSSSDDDDDDSEMDRIAKELEKKRNHPDRLH
PELWFNDPGEMNDGPLCRCSLKAQRSGIRHGYYVGEDSLKPCDPWTNNADHLHHYLITIS
PPTNFLIKTPTVIMHDSHEFIFEGFSLLSHNPLEEVPTCKVIRFNIEYTILYLQEKIPDN
FCVRELDIFYKYLFTELLELVDLNLHAMGDPDGCPRFHFMPRFVRKLADNGKEILSMNEV
LTYLLKNSGPLVQPEDLAQLLSMSQYQWQNYADQLKGMVVTCPGMKPCSIRVDQLDRDQV
SEETINYPVIVHFGIRPPQLSYAGNPEYQKAWREYVKFRHLLANMPKPSFEDKRRLEAKE
NRLQEMRMTSKMKRDVTVAVSAQGFYRSGIMCDVVQHAMLLPVLVCHLRFHCSLEVLEER
ILYKFRTRFLLQLALTHPSYRENFGTNPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGI
NTLINIMSRFGRNLETESKITHNERLEFLGDAVVEFLTSIHLFHLFPSLEEGGLATYRAA
IVQNQHLAVLAEKLGLDQFMLYAHGSDLCHDFELRHAMANCFEALMGAIFLDTGIEEADS
VLSSTLFKGEDLLHNIWVNYPPHPIQMQEPQGDRKWIKSFPILTNLSKFEESIGVHFNHI
RLLARAFTDRSIGFNNLTLGSNQRLEFLGDTVLQLVASEYLYKYFPEHHEGHLSLLRSSL
VNNRTQAVVCDDLGMTAYAMYSHLKTELKTKDRADLLEAFLGALYIDRGLDYCRAFCQVC
FFPRLHQFIMNQDWNDPKSKLQQCCLTLRTMDGGEPDIPIYKVIECKGPTNTRVYTVAVY
FRGRRLAKASGHSIQQAEMNAAREALLNSKELFPQLDHQRRVIEKSVKIQGVSKLGSPHR
ERDRGRDKDRERERSGRGYRREEERRGDKERGREREKLWEERHKEGERSRGGDSRGRVFG
ERDQLAGDRERDSERNKANERDKFSRERDKPGGERDRLTGERERLPGERDRPYSDRSRST
GDRKYKLMSDEERRYRSDAEKLHDDREPSEESKLRTCTKSMSRENADSDRNREKYKSYMR
MPSAEHHLKPTRNSRSDSSAKPSRSAW
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtggaccatcatgggcaggagggccagcatgcccacagtggccatatgtagga
ccgggtaatggtccgccaccacaatggggtgcttctgcaggtggaatgcatcagtaccct
cacaaccagccaccgcctgtgaatgctccaccacaaaactgggcaaatgctcatggacct
cctcctatgtatggagcaccaaatcaaggcatgcctgaagctgctccccctgatcactat
gctgtagctcctcagacctccatgccaaaccagtataatgttcctcagcacagtgtaccc
caaggccctccctcaggcaccccctcaggcctgccatctaatgggcattttggtccccct
ccagtgaggtcatgtcctggacctgttggcattcctcagtgcccctcagttggcacatct
ggacccctctcacttacgcagtttccgcctccagggccttcacctggcccacctcctggc
ccaggctatgttggaacccccatgtatgggtggggagtgtctcctcctccttcttcacaa
atggtgcagactggccagcctcctcctggctctgcttggggtggtgtcagcccaggggat
atacatcaccagacgtggcagggatctgattgggattcagagagacctcatagacctcac
actgaagaccttacaacaaggtctggtattgatcgaagtggcgtaccatcaagaaacagc
tacagggggaatagcagaggtagagaccatgactcttctatccatgggcaagagaggtct
tctcaggtttcttcaaggtcagggtatgaagatgatctttgtagcatagactcaagatac
aaggagaatagaagctactctgatgcttactctagcaacggatggcgtgatagacacggc
aggaggaggaaaaggtcaagaagtccttctgactactcatctagaagagtagagtcaaga
aaccgcacagagcctcgaaggtgttcaagggattctcgcgaaagatctcggtatgacaat
gatcgtaaagaacggtattcaaggagtcctggatctcattctcgttcaagttctcgacct
ttgtccccagaaaggaagagatcacgtccctcctggagccctgacaggcacaagtcacga
agccccgtcaaagaggtgggtagtnaaagaaaaaaaaggagtgcagtggacctccccccc
gaagagaaggaggagtgcgaatccctgccaactatacaagaagaggagaagtctaagcct
gcgtcaaaggaggaggaactagaggaagaagaggatgtgaaggctgcatgggtgcgctca
gctcctgccgatctttattaccagcgtgatgagaagaatccattagtgatgcgtgcaacg
aagaagctaatgtcgctttgtgaagtagttgaagaaaaattgataatgagaggtactaga
atacgagaagaaaagaggaaggcaagggaaaagaaggaacagcaagagcagcatcaggca
atagcatgcagaaatgggtgtttgagccttaaaaaggacaaaaccaaggaacaagatgga
gagaccagagaatcatcagcagagaataatgtaccagaaaacagcaccggcacaaagggc
aaggagtcgggggaggaatgcaatggcatcaccacaaaggaagctcaggaggatgtggag
acagccaataattccgatattgcttctttagaggtggagatagtgaagaacccctcttca
gaaggcattctttgtgaaagtgtaggagtaaagtgtaagcacaaacacaagcacaaacac
aggcatataaacaaggaaaacaatgacaaagattcagaaaagggcgacagtagcagcaac
agcagcagtgatagtgatagtgacaatagcagtagtagtgacgatgatgatgatgacagt
gagatggacagaattgccaaggagctggaaaagaaacgaaaccatcctgatcggttgcat
ccagagctgtggttcaatgatccaggagaaatgaatgatggacctctttgccgatgctcc
ttgaaggcccaacgctctggcatccgtcatgggtattatgttggagaagatagcttaaag
ccatgtgacccctggacaaataatgctgatcatcttcaccattatctcatcacaatatct
ccacccactaatttcttgatcaagactcctactgtgattatgcatgatagccatgagttt
atatttgagggtttctcattgctctcacacaaccctcttgaagaagttcccacatgcaag
gtcattcgtttcaatattgagtacaccatcctctacctacaggaaaagatccctgataat
ttttgtgtccgagagttggacatattctataagtatctctttaccgaactgttggaactt
gtagacttgaacctccatgccatgggggatccggatggctgtccacgattccattttatg
ccgagatttgtcaggaagttggcagataatggcaaggagattctttcaatgaatgaagtg
ttaacatacttgcttaagaatagtgggccacttgtacaaccagaggacttagcacaactt
ttgagtatgtcccagtatcagtggcagaattatgctgaccagctgaaaggaatggtcgtc
acttgtcccggcatgaagccctgcagcatccgagtcgaccagctagacagagaccaggtt
agcgaagagaccatcaattaccccgtcattgtgcattttgggatccggccgccgcagctt
tcctatgccgggaatcctgagtaccagaaggcgtggagggaatacgtaaaatttcggcac
ttgctagccaacatgcctaagccatcatttgaggacaagaggaggttggaggcaaaagag
aaccgcttgcaggagatgcggatgacctctaagatgaagcgagatgtgactgttgctgtc
tctgcgcagggattctaccgctctgggattatgtgtgatgttgtccagcatgccatgttg
ctccctgtgttggtatgtcacctgcgcttccactgttcactagaggtcctagaagagaga
atcctgtacaaattccgcacgaggtttcttctgcagttggctcttacccacccctcctac
agagaaaactttggcacaaatcctgatcacgcccggaactcgctcacaaattgtggaata
cggcagcctgaatatggggatagaagaatccattatatgaatacccgcaaaaggggcata
aacacactgataaacatcatgtctcgttttggacgcaaccttgagacggagagcaaaatc
acacataatgaacgtctggagtttcttggtgatgctgtggtagaatttcttacctccatt
cacttgttccacctcttccccagtctagaggaaggtggcttggcaacttacagggcagct
attgtccagaaccaacatctagcagtgttagcagagaagcttggactggaccagttcatg
ctgtatgctcatggctctgatctgtgtcatgatttcgagctgcgtcatgcaatggccaac
tgctttgaagctctcatgggagccatttttcttgatactggaatagaggaagcagacagt
gttctaagttcgaccctgtttaaaggtgaggatttgttgcacaacatctgggtcaactat
ccccctcacccaatacaaatgcaagagccgcagggggaccgaaagtggatcaaatccttc
ccaatccttactaatttatccaagtttgaggagtccattggtgtgcacttcaaccacatc
cgcctgttggctcgagccttcactgaccgcagcatcggcttcaacaaccttactctagga
tcaaatcagcgtctggagtttttgggagacacagtcctccagttggtggcgtctgagtac
ttatataaatattttcccgaacatcatgaaggccacctctcattactccgttcatctctg
gtaaacaaccggacccaggctgtggtatgtgatgacttggggatgacagcatatgcaatg
tattcacacttgaagacagagttgaaaacaaaggatcgtgctgatttgctggaagcattt
cttggggccctctatattgataggggtctagactactgccgcgccttctgtcaggtgtgt
ttcttcccacggttgcatcaattcatcatgaaccaggattggaacgatcccaagagcaaa
ttgcagcagtgttgcttgaccctgaggactatggatggaggggaacctgacattcccatt
tacaaagttattgagtgcaagggccccaccaacacacgtgtgtacaccgtagctgtgtat
tttcgtggacgacgtttggccaaggcgtcggggcattcgattcagcaagcggagatgaat
gcagctcgagaagctctcctcaactccaaagagctgttcccgcagctggaccaccaacgt
agagttatcgagaagagcgtcaagatccagggcgtctcgaaacttggctcgccacacaga
gagagagatcggggcagagacaaagaccgggagagggagaggtccggacggggatacaga
agggaggaggaaaggcgaggagataaggagcgcggcagagaaagggagaagctatgggag
gagaggcacaaggaaggagaaagaagcagaggtggagatagtagaggccgagtgtttggg
gagagggatcagctggccggagacagggagagagacagcgagaggaataaggcgaacgag
agggacaaatttagcagggaaagggacaagccgggtggggagagagatagactaacagga
gagagagagaggctaccaggggagagagacagaccgtacagtgaccgaagcagaagtacc
ggagaccggaaatacaaattaatgtcagacgaggagaggagatacagatcagatgcagaa
aaattacacgacgacagggagccatccgaagaatcgaaattgcgtacatgcacaaagagc
atgtcaagagaaaatgcagactcggaccgaaatcgagagaagtacaagagctacatgaga
atgccatctgctgagcaccacctaaaaccaaccaggaattccaggagcgattccagtgcg
aagccctcgcgctcagcttggtaa
DBGET
integrated database retrieval system
