Penaeus monodon (black tiger shrimp): 119571608
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Entry
119571608 CDS
T08784
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04512
ECM-receptor interaction
pmoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119571608
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119571608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoo04147
]
119571608
00536 Glycosaminoglycan binding proteins [BR:
pmoo00536
]
119571608
Exosome [BR:
pmoo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119571608
Glycosaminoglycan binding proteins [BR:
pmoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119571608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C4
Collagen
Motif
Other DBs
NCBI-GeneID:
119571608
NCBI-ProteinID:
XP_037774768
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
DFEGFGGICGGFREDLEGPRRRQARPGARESPETGDSTPCQDPGGLRIWRDLWGISGGSG
GTPAEAGEAGRQGIAGDRGFDALPGPRGIKGFRGDAGRKGEVGRPGIPGRPGEVGTRGRI
GQPGLPSKKGEPGEKGIAGRPGKAGRPGRSGQKGRPGDFGPDGPAGEKGLPGGSLPGLEG
PGGEEGFPGAPGRDGLPGLRGQRGPPGDDVRFRGAPGDRGPQGFPGPKGIRGDVGRPGLT
RPPGLAGRRGDLGERGYRGLPGVAGDLGPPGDPGLNGVIGAAGLKGLPGNPGLPGFHGGV
GIPGPRGDVGLPGGLGGTGFMGKPGRDGAKGIAGLPGTSGRPGPSGRQGPRGEGGERGFD
GNPGPPGQPGLPGSPGDPAPPGPPPKSRGHLITRHSQELTTPRCPSGSRLMWDGYSLLHV
MGNHRAHGQDLGAPGSCLRKFSTMPYLFCNLNNVCDYSQRNDYSYWLSTREPMPMMMTPI
EGRDIERYISRCVVCEVPSLTIAVHSQTLEVPDCPVGWDSLWIGYSFIMHTDSGAEGSGQ
SLLSPGSCLEDFRTSPFLECTGQGRCNLFPSAFSYWLATIDLEDQFRKPDQQTLKAGDLK
SRVSRCNVCLRSRRGGGGGTGGGGTGGGFGGRGGGGGGFGGRGGGGSSGSVSFGGGEGRY
GGGGGGGGRGGGGGGGGGGGVSFTGGGTEVDESYDQGRDYYDYDYGFEEEREGGGGGGRG
GEGTFTSVEEEEEEVEMEVEKQPLISVVEEEVEEKEPLLSGKQTTRINAVINLVSYDGRM
HRREQAWGTCVVKNSCLTGHDVVTMIDVIVLLYVNFVYLCVTVREFSALVCVTLSEFSAL
VRVNLREFRALVRVFVNFVY
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gattttgaaggatttggagggatttgtgggggatttcgggaggatctggagggaccccgg
cggaggcaggcgaggccgggcgccagggaatcgccggagacaggggattcgacgccctgc
caggacccagggggattaaggatttggagggatttgtgggggatttcgggaggatctgga
gggaccccggcggaggcaggcgaggccggacgccagggaatcgccggagacaggggattc
gacgccctgccaggacccagggggattaagggttttcgaggcgacgcaggaagaaaagga
gaggttggcaggcctggcatccctggtcgacccggcgaggttggcacgcgtgggcgcatc
ggccagcctggtcttccgagcaagaagggcgaaccaggggagaagggcatcgcaggtcgc
cctgggaaagcaggtcgacccggcaggtcaggtcaaaagggccgacctggcgacttcgga
cccgacggacctgcgggcgagaagggcctacccggagggagcttgccgggtttggaggga
cccggaggggaggaaggattcccgggggcgcccggacgcgacggcctgcctggcctgagg
ggacagcgaggcccccctggcgacgacgtgcggttcagaggagcccctggtgatcggggt
ccgcagggtttcccagggcccaagggcatccgcggcgacgtgggccgacccggcctgacc
cgcccgccaggtctcgcaggtcggagaggtgacctcggcgagagaggttaccgcgggctg
ccaggcgtcgccggtgacctcggcccgcctggtgaccccgggttgaacggggtcatcggc
gcggcgggcttgaagggcttacctggtaaccctggcttacctgggttccacggaggggtt
ggtatccctgggccgcgaggagatgtcggattgcctggtggtctcggcggcacaggcttc
atggggaaaccaggtcgagacggtgccaagggcatcgcgggtctacctggcacttccggt
cgacctgggccctccgggaggcagggcccgaggggagaggggggggagaggggtttcgac
ggcaatcccggtcctccggggcagccaggcctacccggatccccaggagaccccgcccct
cctggccctccccctaagtccaggggtcacctgatcacacgccattcgcaggagctgacc
acgcccaggtgcccttccggaagtcgcctcatgtgggatgggtattcgctcttgcacgtc
atgggcaaccacagagctcatgggcaggatttgggagcccctggcagttgcctaaggaag
tttagcacaatgccctatctcttctgcaacctgaacaacgtgtgtgattattcgcaacgc
aatgactattcgtattggctctcgacccgagaaccgatgcctatgatgatgacacctatc
gaaggcagggatatcgagagatacatttcgaggtgcgtcgtgtgtgaggttccctccctc
accatcgccgttcactcacagactctggaggtgcctgactgtcctgtgggttgggactct
ctgtggattggatattcgttcatcatgcacacggactctggcgccgaaggatcaggtcag
tcgctcttgagcccggggtcttgcctcgaggacttcaggacgagtcccttcctcgagtgc
acgggtcaaggacgatgtaatctgttcccctcggccttctcctattggctggccacgatc
gacctcgaggaccagtttaggaaaccggatcaacagacactcaaggccggcgacctcaag
tcgagggttagcaggtgtaacgtgtgtttgaggagcaggagaggtggaggaggaggtact
ggaggaggaggcactggaggtggatttggtggaagaggaggtggaggaggtggattcgga
ggacgaggaggtggaggctcaagtggaagcgtcagctttggaggtggagaaggacgctac
ggaggaggaggtggaggtggaggaagaggtggaggaggaggaggtggaggaggaggtgga
gtgagcttcacaggtggaggaacagaagtggatgagagttacgatcaagggagagattac
tatgactatgactatggtttcgaggaggagagagaaggtggaggaggaggtggaagaggt
ggagaaggaacctttacttcggtggaggaggaggaggaagaggtggagatggaggtggag
aagcaacctttaatttcggtggtggaggaggaggtggaggagaaggaacctttactttcg
ggaaagcaaactacgcgtattaatgctgttataaacttagtgtcgtatgacggccgtatg
cacaggcgagaacaagcgtggggcacgtgcgtggtcaagaacagctgcttaacagggcat
gacgtagtgactatgatcgacgtgattgtgttactctacgtgaatttcgtgtacttgtgt
gtcactgtccgtgaatttagtgccctagtgtgtgtcactctaagtgaatttagtgcccta
gtgcgtgtcaatctccgtgaatttcgtgccctagtgcgtgtcttcgtgaatttcgtgtac
tag
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