Penaeus monodon (black tiger shrimp): 119571718
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Entry
119571718 CDS
T08784
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119571718
09123 Folding, sorting and degradation
03018 RNA degradation
119571718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119571718
03041 Spliceosome [BR:
pmoo03041
]
119571718
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119571718
mRNA degradation factors
5'-3' decay
Lsm complex
119571718
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119571718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
RHH_1
Motif
Other DBs
NCBI-GeneID:
119571718
NCBI-ProteinID:
XP_037774826
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGNLVSCDNWMNINLKDVICTSRDGDKFWRMPECY
IRGSTIKYLRLPDEVIDLVKEEVIARGRGRGESRGRGGPGRGRGGPGRGGFGGRGRGGPP
GGGRGGPGRGGMKKKEGYK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctctctctgttaaagacagctcagaatcatcccatgctggtagaattaaag
aatggagaaacttataatggaaatttagtgtcatgtgacaactggatgaatataaaccta
aaagatgtcatctgcacatcaagggatggtgacaagttctggagaatgccggagtgctat
attcgagggtcaactattaagtaccttcgacttcctgatgaagtgattgatttggtaaag
gaagaggtgatagcaagaggacgaggtagaggtgaaagtagaggtcgtggtggtccagga
agaggacgtggaggtcctggtagaggtggttttggaggccgtggacgtggtggcccacct
gggggaggacgtggaggcccaggacgtggaggcatgaagaaaaaagaaggatataaatag
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integrated database retrieval system
