Penaeus monodon (black tiger shrimp): 119572410
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Entry
119572410 CDS
T08784
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119572410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119572410
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119572410
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119572410
Coactivators
SAGA/TFTC/STAGA complex
119572410
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119572410
STAGA complex
119572410
TFTC complex
119572410
SAGA complex
119572410
SLIK complex
119572410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR75_2nd
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_SPT8
Ge1_WD40
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_RIG_1st
Beta-prop_DCAF12
RMC1_N
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
119572410
NCBI-ProteinID:
XP_037775451
LinkDB
All DBs
Position
4:60407836..60419190
Genome browser
AA seq
653 aa
AA seq
DB search
MRKVRTEKVMAHVSDYLKRRNLESGGPGGSVTLTEQQVGILGLVSPSAPNTFTFSTTSTQ
HTHVDHQYVRLKSWMMEASEPCRSELSQVLFPLFVHLYLELVAATGRQAANKFFKKHYQV
FLVNRDYENTLSQVVSASSINSSGDMNSSPVIQNLKSGKYLVRLSELTLNYFLRYLKSSE
NPTLLQIFNTYIEVEVDESGAGSSGAVFRGPDLNTSSSTALVNGHTPDSLSSDASAYAAD
GMDCSPEELRKVKDIMARVRSAQPTAPSLCVYTVTNAYNGLSCANVNTEGQLLACGFEDS
VIKLWKLTPPLHDIGFGKKKTVVGPRGGISHTLLACDDSRIEDSGERDDDDKEEEATAAE
IRNGGRRRNRGGELFALRGHSGPVLDTAFSHDSNYLLSVSEDCSMRLWDLNSGNAVALYR
GHSYPVWCVAVAPLTMYVATGSYDTTARLWSTDATYPLRTFSGHTRAVDCVAFHPNGTYL
ATGSCDRSIRLWQVTDGDAARILLHHKSAINTMSFSPNGKYLASGSEDGTVVVWDLAGGR
VMTEISSSSQVNSGNTASGTPHQDSIMNVCWSTDSSLLVSASSDGCVRTSHLKQTPASND
GTNSWELNEVGQVHCSGSTNGGSGNNGASGVLLHTSLTSHNYLTSVIALDVER
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagtgaggacagagaaagtgatggctcatgtcagcgactacttgaagaggaga
aatctcgagagtgggggaccaggaggaagtgtgacgctaacagaacagcaggtggggatt
ttgggcctggtttctccctcggcccccaacaccttcaccttctccaccacctccacccag
cacacgcatgtggatcaccagtatgttaggctaaaatcatggatgatggaggccagtgag
ccatgccgatccgaattgtcccaagttctgtttccgctctttgtccacctgtaccttgag
ctggtagcggccacggggagacaagcggcaaacaagttcttcaagaaacattatcaggtg
ttcttggtgaaccgtgattatgaaaatacactctctcaggttgtaagtgcatcttctata
aattcttctggagacatgaattcttctcctgttatacagaatctcaagagtggcaagtac
ctggtacgtttaagtgaactgactttaaactactttctgcgatatctgaagtcaagtgag
aaccccacactgttgcagatattcaatacatacattgaggttgaggtggatgagtcaggt
gctggaagttcaggagctgtgttcagagggcccgatttgaacacttcttcctcaacagct
ttagttaatggtcacactccagactcattgtcctctgatgcctctgcttatgcagctgat
ggaatggattgtagcccagaagaactgcgcaaagtgaaagacatcatggctcgcgttcgg
tcagcccaacccactgccccttccttgtgtgtgtatacggtcacaaatgcttataatggc
ctgagttgtgccaatgtgaatacagaaggacagcttttagcctgtgggtttgaagacagt
gtaattaaattgtggaaattgacaccccctttgcatgatatagggtttggaaagaaaaaa
acagtagttggtcccagaggtgggatatcgcacacgttacttgcatgtgatgattctcgc
attgaagacagtggtgaaagagatgacgatgacaaagaggaagaagccacagctgctgag
attcgtaatggaggaaggagaagaaatcgtggtggggagctctttgcccttcgtggacac
agtgggcctgtgctggacacagcgttcagtcatgattcaaattacttgttatcagttagt
gaagattgctccatgagactgtgggacttaaatagtggtaatgcagtggctctgtataga
ggtcattcctatcctgtgtggtgtgtggctgtagcccctctcactatgtatgtggcaaca
ggctcatatgatacaactgcaagattgtggtccacggatgcaacataccccctacgcacc
ttttcaggtcacacaagagctgtagattgtgtggctttccatcccaatggcacttaccta
gctactggatcctgcgaccgtagtattagactctggcaagtcactgatggtgatgcagca
cggatccttctgcaccacaagtcggcaatcaacactatgtcattttctccgaatggaaag
tacctggcctctggcagcgaagacggcacagttgttgtctgggaccttgctggtggacgc
gttatgacagaaattagcagtagtagtcaagtcaatagtgggaacactgcctcaggtact
ccccaccaagactcaatcatgaatgtgtgttggtctaccgattcatccctccttgtgtct
gcatccagtgacggctgtgtgcggacaagtcatctaaagcaaaccccagcaagcaatgat
ggaaccaattcctgggaactgaacgaagtgggccaggttcattgcagcggaagtacaaat
ggaggaagcggcaataatggagcgtcgggagtcctgctccacacgtctctaacgtctcac
aattacctcacttctgtcattgctctcgatgtggagagatag
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