Penaeus monodon (black tiger shrimp): 119572997
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Entry
119572997 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase subunit gamma-1-like
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119572997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119572997
03029 Mitochondrial biogenesis [BR:
pmoo03029
]
119572997
Enzymes [BR:
pmoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119572997
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
119572997
Mitochondrial biogenesis [BR:
pmoo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
119572997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
DUF1454
Motif
Other DBs
NCBI-GeneID:
119572997
NCBI-ProteinID:
XP_037775912
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All DBs
Position
5:13467175..13489938
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AA seq
889 aa
AA seq
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MPRVIIGHNVSYDRLRVCEQYQVEGTPLRFVDTMSLHIAVSGLISEQRAMMLKNKNADKK
VRLPWMFVGCQNSLNEVFKFYCRTDEELKKDTRDVFVKGSILEIREDFQNLMSYCANDVK
ATHMVLVKLLPLFFERLPHPVSFAGMLEMGTTFLPVTQNWHKYISAAESEFHRMERLLNE
ELVKQARGALKYVDNKEYENDPWLWSLDWSVPKGRVKKLPGYPNWYRKLCAHTGEREGTP
EPENMSTSLQVVPRLLRLTWNGLPLHYEKKYGWGYLKPMYDSVNEISYQKTTLDSNSVCQ
TFPVNTLYKMYAGQKIDIESFLKDKENKTNDLPETEEDWLSLLSESDSGVNVYEKRKLSD
QNQKKKDEERGYDIGIPGVVFVPLPHKDGPSNRVGNPLAKDFLLKIEDKTLSSYFGDIAE
LVLKTSKSLSYWRNNRDRILSQMVIWNDQNDKSGKDISEANEKKECGTGIILPMVVTAGT
VTRRAVEPTWMTASNAYVDRIGSELKAMVEAPPGYHFVGADVDSQELWIAAVLGDAYFSG
EHGATALGWMTLQGKKSDGSDMHSRTANTAGISRDHAKVINYGRIYGAGLRFIQRLLRQF
NPKLSEEETQQRATQLFATTKGQKGWYLNNMGQNLALELNYPSSGEALDRKESQWYSVEA
IFLIXSXFSFAPINKLLRQARYNKHRGILYDVVDGPAVWVGGSESYMFNCLEAIARSEEP
RTPVLGARVTRALEAKYVDDQYMTSRVNWVVQSSAVDYLHIMLVSMKWLFQEYNIRGRFC
ISIHDEVRYLVATEDSHRAALALQITNLLTRSLFAQKLGFKDLPQSVAFFSAVDIDYVLR
KEPHLDCVTPSNPEGLNKGYGIPPGEALDMQKILEITSGILEKNGEVAR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagttatcattgggcataatgttagttatgatagattaagggtatgtgagcaa
taccaagtggagggaacgccattacgttttgtggatacaatgtcattacacatagctgta
agtggacttatttcagagcagagagcaatgatgctcaaaaataaaaatgcagataagaaa
gttaggcttccttggatgtttgttggatgccaaaacagtcttaatgaagtctttaagttt
tactgccgcacagatgaagaactgaaaaaggatactcgagatgtatttgtcaaaggcagt
attcttgagattcgagaagattttcaaaatctgatgagttactgtgctaatgatgtgaaa
gctacacacatggtactagtaaagttgttaccactattttttgaacgacttcctcatcca
gtaagttttgctggtatgttagaaatgggaacaacatttttaccggtaacacagaactgg
cataagtatatcagtgctgcagagtctgagttccatagaatggaaaggctgctaaatgaa
gaattggtgaaacaagctaggggagcactaaaatatgtagataacaaagagtatgaaaat
gacccatggctttggagtctggactggtcagtaccaaaaggaagagtaaagaaattacct
gggtatccaaattggtataggaaattatgcgcgcacactggtgaaagggaaggtacacct
gaacctgaaaacatgagcacaagtttacaggttgtaccaagactgctaagattaacctgg
aatgggcttcctctgcattatgagaaaaaatatggttggggatacttgaaacctatgtat
gatagtgtgaatgaaatatcatatcagaaaacaacattggacagcaacagtgtgtgtcag
acttttccagtgaatactctctataagatgtatgctggccagaaaattgatattgaaagt
ttcctaaaagataaagaaaataagaccaatgatctgcctgaaacagaagaagattggttg
tcccttttgtctgagagtgattcaggcgttaatgtatatgaaaaaaggaaattaagtgac
caaaatcaaaagaaaaaagatgaagaaagagggtatgatattgggattcctggtgttgta
tttgttccattgccacataaagatggaccaagcaatcgtgtgggtaatccccttgcaaaa
gactttcttctgaaaattgaagacaaaactttaagtagttactttggagatatagcagag
ttagttctgaagaccagtaaatcattgtcatattggcggaataacagagacagaatactt
tcccagatggtcatatggaatgaccagaatgataaaagtggtaaagatatatcagaagct
aatgaaaagaaggaatgtgggactggtattattttgccaatggtagtaacagcgggtaca
gtcactcggcgtgcagtggaaccgacatggatgaccgcctctaatgcctatgtagatcgc
atcggttctgaactgaaagccatggttgaagcccctcctgggtaccattttgttggagca
gatgttgattcgcaggaattgtggattgctgctgtgcttggtgatgcatatttctctggt
gagcatggagctactgcccttggctggatgacattgcaagggaaaaagtctgatggttca
gatatgcacagtcgaactgccaatacagctggcatatcacgtgatcatgcaaaggttatc
aattatggaagaatttatggggcaggattacgctttattcaaaggctgttgcggcagttc
aatcctaaattatcagaagaagaaactcagcaacgtgccacccaactgtttgcaactacc
aagggacaaaaaggatggtacctcaacaatatgggacaaaatcttgccttggaactgaat
tatccaagcagtggagaagctctagatcgcaaagagtcacaatggtacagtgttgaagcc
attttccttatatgatcataattctcttttgccccgataaataagttgttgaggcaggcc
agatataacaaacatagaggcatcctttatgatgttgtggatggtcctgctgtatgggta
ggtggctctgagtcgtatatgttcaactgtttagaagcaatagccaggtctgaggagcca
cggacaccagtactaggggcaagagtaactcgtgctcttgaagcaaagtatgtggatgac
cagtacatgactagcagagtgaactgggttgtccagagttcagctgttgattatcttcac
atcatgcttgtgtcaatgaagtggttattccaggagtacaacattagagggagattttgt
attagcatccatgatgaggtgagataccttgtagcaacagaagactcccatcgtgctgct
ctggctctgcaaatcaccaacttactgacacgttcactcttcgctcaaaaattaggtttc
aaagatttgcctcagtcagtagcattcttcagtgcagtagacatagattatgttcttcga
aaagagcctcatctagactgtgttacaccttcaaatcctgaaggactgaataaagggtat
ggaattcctccaggagaggcacttgatatgcagaaaattcttgagatcacctcaggtatt
cttgagaagaatggagaagttgccagatga
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