Penaeus monodon (black tiger shrimp): 119573114
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Entry
119573114 CDS
T08784
Name
(RefSeq) DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119573114
03015 mRNA surveillance pathway
119573114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119573114
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119573114
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119573114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
TAFA
Motif
Other DBs
NCBI-GeneID:
119573114
NCBI-ProteinID:
XP_037776077
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All DBs
Position
5:complement(22896765..22929858)
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AA seq
523 aa
AA seq
DB search
MWSAFGECELATLVACVLRVVSRSRKEALAQFSLVFLSFPLDDMSDDWAKAAEEQEAKDL
ASKVQTLSIPEDASTAKPAPATEAEETPSEASTEEALTAAEESLMRKVMRKGIIESKNNV
EVYRKDPNNPLYSVKDFEALNLRKELLDGIYDMGFKLPSKIQETALPTLLADPPVNMIAQ
SQSGTGKTAAFSLAMLSRIDPKKRCPQALCLSPTLELALQTLESITKMGKKCTDIAIRAA
VKGETVARGQCVNEHIVVGTPGKVLDWVKKYKCLDLSQCRVFVLDEADVMIATQGHQDQS
VRIHKHLPPTCQMMLFSATYEDQVVEFAEAIIPNPVIIRLHRNEETLENIRQMYVECKNE
EEKYLAISNIYTIPVGNSMFFCHTKRSASSLASRLKQDGHQVALLTGDLTPDERVRVLTR
YREGQERVLICTNVLARGIDVESVNLVVNYDLPVKPGSREADCETYLHRIGRTGRFGKTG
NAINIVEGRSDILILKEIESHFNIKIEKLDYNNVEEIEKLGED
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtggtctgcgtttggcgagtgcgagctggcaacactggtcgcctgcgtcctgcgtgtt
gtgtcccgctcgaggaaggaggctctcgctcagttctcgctggtattcctctcttttccc
ctcgacgacatgagtgacgactgggctaaggccgcggaggaacaagaggccaaagatctc
gcctcgaaggttcagaccctgagcatcccagaggatgccagcactgccaaaccagctcca
gccacagaggctgaggaaacgcccagtgaggcctcaacagaggaggcgctcacagccgct
gaggagtctctcatgcgcaaggtgatgcgcaagggcatcatcgagtccaagaacaatgtg
gaggtttatcggaaggatcccaataacccactgtactctgtgaaggactttgaagctttg
aacctgcggaaggagctgctggatggcatatatgacatgggcttcaagttgccctccaag
atccaggaaacagctctgcccacacttcttgctgacccgcctgtgaacatgattgctcag
tcacagtcagggacaggcaaaacagcagccttctcactggctatgcttagtaggattgac
ccaaagaagaggtgccctcaggctctctgtttgtcccccacactggagctggcccttcag
acactggagtcgatcaccaagatgggcaagaaatgcactgatattgccatccgtgccgct
gtgaagggagaaactgtggccagaggacagtgtgtgaatgagcacattgtggtggggacc
ccaggcaaggtgctggactgggtcaagaagtacaagtgccttgatctgagccagtgcagg
gtgtttgtgctggatgaagctgatgtcatgattgccacgcagggacatcaggaccagtca
gtgcggatccacaagcacctcccccccacctgccagatgatgttgttctcggctacctat
gaggatcaggtagtggaatttgccgaggccatcatacccaacccagtcatcatccgtctt
cacaggaatgaggagacactggagaatattcgtcagatgtatgtggagtgtaaaaatgag
gaggagaaatacctggccatctcaaatatctacaccatcccagttggtaactccatgttc
ttctgccataccaagcgaagtgctagttccttggcctcacgtttgaaacaggatgggcac
caggtggcactgctgacaggtgacttgacaccagatgagagggtcagagtacttactcgt
taccgtgagggtcaagaacgtgtactcatctgtaccaatgtccttgctcgtggcattgat
gttgaatcggtcaacttagtagtaaactacgacctgccagttaagcctggctcacgagag
gctgattgtgaaacttacctccaccgcatcggtcgcacaggaaggttcggcaagactggc
aatgccattaacattgtggaaggacgcagtgacatcctcatcttaaaggagattgagagt
cacttcaatattaagatcgagaaattggactacaacaatgttgaagaaattgaaaagctt
ggggaagactag
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