Penaeus monodon (black tiger shrimp): 119573250
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Entry
119573250 CDS
T08784
Name
(RefSeq) poly(A) polymerase type 3-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119573250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119573250
Enzymes [BR:
pmoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
119573250
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
119573250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
119573250
NCBI-ProteinID:
XP_037776307
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All DBs
Position
5:complement(50048352..50074110)
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AA seq
606 aa
AA seq
DB search
MDASKTLGMTSAISLAKPKASDLEHTRELEEYLRDAGMFETDAELNHRFEVLGKLNNLVK
AWIRDVSINVKNMPPQIADTVGGKICTFGSYRLGVAGKGADIDALCVAPRHIERQDYFTS
FYELLKEQSEVTEMRAVEEAFVPVIKMKYENIEIDLLFARLALKEVHDSVDLNDDSILKN
LDEKCVRSLNGCRVTDEILRQVPNRESFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAML
VARTCQLYPNATASTLVEKFFLVFSKWTWPAPVYLKQPYDAKHGFKVWDPRVNVQDRFHL
MPIITPAYPQQNSTFNTSQSTRAVMVEEFKMGLQITEDIMLGKATWDKLFQPPNFFMKYK
HYLVVIAVARTPEDHLEWYGLVESKIRHLISSLEHNPAIKTVHINPVTFNCQDPEYKDKP
HSSWFLGVDFNKSENVNIDLTNDINKFVEVVYKQSTYNKAYKEGMEVNCKYVKRKQLTNY
LSQEDLDKYKPKVEEGQPQTIRQKRKSDVGSQDSPSRESPENNKKPKIDGDLTTQATLNG
DDSNISIDEAFSNTSIPGLAPEINAAQHKPPPRTKPPCSHQRARVILKARRQASPSGPGK
TEALKH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggatgctagtaagaccttaggaatgacgtcggcgatcagcctggcaaaacccaaggcg
tctgacttagagcatacaagggaactggaagagtatttaagagatgcgggcatgttcgag
actgatgcagagctaaatcacagatttgaagtccttggaaagctgaacaatcttgtaaaa
gcttggattcgagatgtaagcataaatgtcaagaacatgcccccacaaattgcagacaca
gttggtggtaagatttgcacttttggttcctaccgattaggtgttgcagggaaaggtgct
gatattgacgccctttgcgttgccccaagacacattgaacgacaagattactttacaagt
ttttatgaactgcttaaggaacagagtgaagtgacagagatgagagcagttgaggaagcc
ttcgtccctgttatcaaaatgaaatatgagaacatcgagattgatttgctctttgcacgg
ttagcattgaaggaagtgcacgattcggttgaccttaatgatgacagcattctcaagaac
ctggatgagaagtgtgttaggagtctcaatggttgcagagtcacagatgagattctgcgc
caagtcccaaatagagagagtttcagattggcgttacgagctataaaattgtgggcgaaa
cgtcatggtgtatacagcaacgttcttgggtatcttggtggtgtgtcatgggctatgctt
gtagcaagaacatgtcagctgtatcccaatgctacagcttccaccctagtggaaaaattc
ttcttagtgttctcaaaatggacatggcctgctcctgtatacctcaaacagccctatgat
gcaaaacacgggtttaaggtctgggatcctcgtgtgaatgtacaagacagattccacttg
atgccaatcatcacaccagcatacccacaacagaattccactttcaacacgtcccagtcc
acaagagctgtcatggtggaggaattcaagatgggtcttcagatcacagaggacatcatg
ttgggaaaagctacatgggacaaactcttccagccaccaaactttttcatgaaatacaaa
cactaccttgttgtgattgctgtggctcggaccccagaagaccatttagagtggtatgga
cttgttgagtcaaaaatccgacacttaatttccagtctagaacataacccagcaataaag
actgtacacataaaccctgtgacttttaactgtcaggacccagaatataaggataaacca
cattcatcatggttccttggggtggacttcaataaaagtgaaaatgtaaatatagatctc
accaacgacatcaataaatttgtagaagttgtgtataagcagagcacctacaacaaggca
tacaaagaaggcatggaggtcaactgcaagtatgtcaagcggaaacagctgacaaactat
ctgtcacaagaggacctcgacaaatacaagcccaaagtagaggaagggcaaccccagacc
atcagacagaagagaaagtcggacgtcggatcccaagattcccccagcagagaaagtcca
gagaataacaaaaagcctaagattgacggtgatttgaccactcaggccactctgaatggt
gatgactccaatatctccatagacgaagcattttcaaatacatcaattccaggcctagct
ccagaaataaatgcagcacagcataagccaccaccacggacaaagccaccatgctcccac
caacgggcgcgtgtcattctcaaggcccgtcgtcaagcctccccctctggtcctggcaag
acagaggctctcaagcattga
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