Penaeus monodon (black tiger shrimp): 119573282
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Entry
119573282 CDS
T08784
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pmoo03029
]
119573282
Enzymes [BR:
pmoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119573282
Mitochondrial biogenesis [BR:
pmoo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
119573282
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
119573282
NCBI-ProteinID:
XP_037776368
LinkDB
All DBs
Position
5:51779295..51802838
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AA seq
1415 aa
AA seq
DB search
MASVLALQRIIHHNGSLLGRLASRRLKEERRILERPGRFTRGNVRYQSTQTSTQVPHPRQ
PKRRSKKAATVDIIQVKDECVSVQRTKVTRLNSLSLEQTLGSVSTALPSTPTTVAEPKLS
DHLEGTLFEEVPLDKFSDLINSQLEQSLRYPSICEAVRWNEGVTHTYDESFASGAFETCA
NRLRDCTVNEELLCERSQLEVEEVLRLSEMDLSFLLSSHPSSGMTSLQPLKVEPADVGEK
EGAEKETKKSGAGGKKSSNNKKKIGKVTSSKKKPTTKKSKAQKGAAVTEANTTILSSEQT
PEEDDMFIDRDSYKKLTREEVATAQTDKLSSTEEGSIPAAEGSPGLDGNVKKGKKQQQQK
KKQDEEARKRLEEIKRRGREISFNQSLESYLSVCINVGMLNRATHTLLYYRRLSKYTNGM
RVSSIGPFRVLLQGHAEKGNFNKMEELLRCMQEDKIPTDQTVFGALLSCLGRQSESLNNT
RNIHGVLTSMTQQGIKLQQVFSDVDFIHDGYECALRAVRRAFPSFTPQQRQTPVHYACNL
VSSLNDDMFSNEVPSPAHDLATSRSLHKWAEEQFAQELNSEITIDSIQNKDVTDEVRFHR
KKLEAWECRWREVLYRTFVDQVDAMKQSFFSNRQDKRMSLYPYLVTLPVDDFVNIMMQEI
GRLAGGSEAFSPSRYVLYRRLGELVFNRYIVQYKKEVGVMDKLKNVYKDYCEWYINSQCR
DGTSYIPRVSWSELASQYSEGPRLDHSPVEWPNTVLLALGQFLYSMLLTKVMVWKPLHSE
KHTYPALYEVERSYGFRVVEEIKPSPTLLDLYRKASKTSLTFEAFVAPMVSPPIPWVSTK
LGGYLLTDVKIVRLPYNAHQQKQRMEERGNQQLFPVMDSLNQLGSIPWMVNKPMLDLLIE
VFNNKGSDELDVPPPPSEHPVPPKIQPSMTSAEIHQIRRQRMDYYKKKSEMHSLWCDALY
KLSLANHFRDRIFWFPHNMDFRGRVYPCPPHLNHLSSDVFRSILQFARGEKLGSNGLRWL
KLHLINLTGIVKKKSIEERLQYCEDILDDILDSADQPLTGKRWWTKSDEPWQTLAACKEL
AAALRSPNPQEFVSHLPIHQDGSCNGLQHYAALGRDEVGAVSVNLTSSHTPQDVYSAVAV
LVEEERKKDAEMGKEIAKVLEGFVRRKVIKQTVMTTVYGVTRYGARLQIEKQLKALDDFP
MDQRWAASQYLVHKTFHSLEKMFTATKEIQDWFTECARVIAQTRTENIEWVTPLGFPVVQ
PYSKTSGNKICVEKLPSSFSMDSFMRPNVMKQKNAFPPNFVHSLDSSHMMLTSLFCQQAG
ITFVSVHDCFWTHANTVDIMNKVCRNQFVALHSEPILEDLSFFLQQKFGYDRRDFAHDGS
ASDSSKMRLNNLLGKVPPKGDFDISNVLRSTFFFS
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtgttggctctgcagcgaataatccatcataacggcagtcttttaggcagg
ttggcttccagaagattaaaagaagaacgaaggattttagagaggccgggaagattcaca
aggggaaatgtgcgctaccagtcaacacagacatccacgcaggtgccacatcctcgccag
ccaaagagacggtccaaaaaggctgcaactgttgacatcatccaagttaaagatgaatgt
gtgtcagtgcagcgcacaaaggttacccgcctcaatagcttgtctttggaacagactctg
ggtagtgtttcaacagccttgccaagtacgccaactacggtggcagagcctaaactaagt
gaccatttagaaggaaccctttttgaggaagtgcctcttgataaattcagtgacttgata
aattcccaactagaacagtccctccgatacccaagcatttgtgaagcagtgagatggaat
gaaggtgtcactcacacctatgatgagagctttgcatctggtgcatttgagacatgtgct
aatagacttagggactgtacagtaaatgaggaactgttatgtgaaagaagtcagctggag
gtggaggaagtgctcagactttctgagatggacctgtccttcctcttatcatcacaccct
tcttctggcatgacctccctgcaaccgttgaaagtagagccagcagatgtaggggaaaag
gaaggtgctgaaaaagagacaaagaagagtggggcaggaggcaagaagagtagtaataac
aagaagaaaattgggaaagttacatccagcaagaagaagcccacaacaaagaagagcaag
gcccagaagggagcagcagtgacagaggcaaacacaaccattttgagcagtgagcagacc
ccagaggaggatgacatgttcatagaccgggactcttataagaaattgacaagggaagag
gtggctacagcacagactgataaactaagcagcactgaagaagggtcaattcctgcagca
gagggaagtcctgggttagatggaaatgttaagaagggcaagaagcaacagcagcagaag
aagaagcaggatgaggaagcaagaaagcgcttagaggaaatcaagagaagaggacgtgag
atcagcttcaatcagtccttggagtcatatcttagtgtgtgtatcaatgtaggaatgcta
aaccgtgcgacacatacactgctttattaccgccgtctctccaagtacactaatggcatg
agggtgtcctccattgggcccttccgtgtcttgctgcagggacatgctgagaagggcaat
ttcaacaagatggaggagctgttgaggtgcatgcaggaggataagatcccgacagatcag
acggtgtttggtgcccttctcagttgcctgggacggcagtcagagtccctcaacaacacc
aggaatatccatggggtcctcaccagcatgacacagcagggtataaagctccaacaggta
ttcagtgatgtagattttatacatgatgggtatgaatgcgctctgagagctgtccgccgc
gccttcccctcattcacgccccagcagaggcagactccagtgcactatgcctgtaacctt
gtcagctccctcaatgatgacatgttctcaaacgaggtgccatcaccagcacatgatctg
gccacaagccgttcacttcataagtgggcagaggagcagtttgcacaagagctcaacagt
gagatcaccattgacagcatccagaacaaagatgtgacagatgaagttcgtttccatcgg
aagaaacttgaggcctgggagtgccggtggcgggaggtgctctacagaacctttgtcgac
caagttgatgccatgaagcagtccttcttttcaaaccgccaggacaagcgcatgtctctt
tatccatacttggtgactcttcctgtggatgattttgtcaacatcatgatgcaggagata
gggaggttggcaggggggtcagaggccttttccccctcacgctatgtcctctaccggcgt
ctaggggagctggtatttaaccgctacattgtgcagtacaagaaagaggttggggtcatg
gacaagcttaagaatgtgtacaaggattactgtgaatggtacatcaacagtcagtgtaga
gatgggacctcatacatccctcgagtcagctggtcggagcttgctagccagtacagtgaa
ggtccaaggctagatcacagtcctgtggagtggcccaatacagtactgcttgcccttggc
cagttcctctactcaatgttgcttactaaggtcatggtatggaagccacttcactcagaa
aagcacacttacccagccctgtacgaggtagagcggtcatacggctttcgcgtggtagag
gaaatcaaaccctccccaacattgctagacctctacagaaaggcatcgaagaccagcttg
acgttcgaggctttcgtagcccccatggtgtcaccccccatcccctgggtctccacgaaa
cttgggggttatctgctcaccgatgtcaagattgttaggttgccttacaatgcccaccag
cagaagcagagaatggaagagagggggaaccaacagctcttccctgtcatggactccctc
aaccagctaggttccattccctggatggtaaacaaacccatgcttgatcttctcattgag
gtgttcaataacaaaggttcagatgagctggatgtgcctccacccccctcagagcaccca
gtaccccccaaaattcagccaagtatgaccagtgcagagatccaccagattcgccgccaa
cgcatggactactacaagaagaagagtgaaatgcattccctctggtgtgatgcactctac
aagctgtctctggcaaaccatttccgagaccgaatattctggttcccccacaacatggac
ttccgaggacgtgtctacccctgtccgccacacctcaaccatctcagctcggatgtgttc
cgctcaattctccagtttgcacgaggggagaaactcggctccaacggcttgcgttggctt
aagttgcaccttatcaacttgacgggcatagtaaagaagaagagtatagaggaacgcttg
cagtactgcgaggacatcctggatgacatcctagactcggcagatcaaccccttacaggc
aagcgatggtggaccaagagtgatgaaccctggcagactctggcagcttgcaaagagctg
gcagcagcccttcgcagtcctaacccccaggagtttgtaagccacttgcccattcatcag
gatggttcttgcaatggcctgcaacactatgctgcacttggacgagacgaagtgggtgct
gtatctgtcaacttgacttccagccatactccacaggatgtctactcagctgtggcagtt
cttgtggaggaagaaaggaagaaggatgcagaaatggggaaggagatagccaaggtcctg
gaaggttttgtgagacggaaggtcatcaaacagactgtcatgacaactgtgtatggggtg
acacgatatggtgctagactgcagattgagaagcagttgaaagccttggatgactttccc
atggaccagcgctgggcagcttcacagtacctggtacacaagacattccacagccttgag
aaaatgtttactgccaccaaggagatccaggattggttcactgagtgtgcacgtgttatt
gcacagacacggactgagaacattgagtgggtaacccccttaggcttccctgtggtgcag
ccatacagcaagacatcgggaaacaaaatctgtgttgagaagttaccgtcatcctttagc
atggattcatttatgcgtccaaatgtaatgaaacaaaagaatgctttcccgcctaacttt
gtccattctctagactcatcgcacatgatgcttacctcacttttctgccaacaagctggt
atcacctttgtctcagttcatgactgcttttggacacatgccaacacagtggacatcatg
aacaaggtgtgtcgcaaccagtttgtagccctacacagtgagcccatcctggaagacttg
tcattcttcctgcaacagaaatttggttatgatcgcagggattttgcacatgatgggtca
gcctcagactcttccaagatgcggctcaacaatcttttaggcaaagtgccacccaaggga
gattttgacatatcaaatgtcctgcgcagtactttcttcttcagctaa
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