KEGG   Penaeus monodon (black tiger shrimp): 119573311
Entry
119573311         CDS       T08784                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030  DNA replication
pmoo03410  Base excision repair
pmoo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119573311
   03410 Base excision repair
    119573311
   03420 Nucleotide excision repair
    119573311
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmoo03032]
    119573311
   03400 DNA repair and recombination proteins [BR:pmoo03400]
    119573311
Enzymes [BR:pmoo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     119573311
DNA replication proteins [BR:pmoo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    119573311
DNA repair and recombination proteins [BR:pmoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      119573311
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 119573311
NCBI-ProteinID: XP_037776402
LinkDB
Position
5:52539485..52558682
AA seq 2272 aa
MVLQNSGKFRSERFERKKDDDPSALDDGSDRRLQQSIENDNVDSKYGFNRYKEPQERVGW
LLNMHPTEILDEDKRLMSAVDYYFIQEDGSRFKVSLPYRPYFFVMTKKEVIQDVTTFLTK
KFAGLLASVEVVRKEDLDLDNHLTGLKQTLLKLSFLTVNDLVKVRQTISGAVKRNKEAAK
SKTVYAEMLLAHASESGESGKKMQDHFENLLDIREYDVPYHVRVSIDCKIFVGLWYSVKG
GGTGPPIITRREDLLVWPDCIVLAYDIETTKLPLKFPDANTDQIMMISYMIDGQGYLITN
REIISEDVEDFEYTPRAEFEGPFIIFNEANEMATIQRFFDHILEVKPHIFVTYNGDFFDW
PFVEARAAFHNLDMFREIGFSKTREGVYFSRPAIHMDCLCWVKRDSYLPVGSHGLKAVAK
AKLRYDPVELDPEDMCSLAAEQPQVLANYSVSDAVATYYLYMKYVHPFIVALCTIIPMEP
DEVLRKGSGTLCEALLMVQAYHANIVYPNKKVAELNKLSSDGHVIDSETYVGGHVEAIES
GVFRADIPCRFRMVPEAFQKLMDNVDRTIKFCVEVEEGIPLDQVINYDEVVEDIKTKLAD
LRDTPCRLENPLIYHLDVGAMYPNIILTNRLQPSAMVDETVCAACDFNKPGATCQRKMSW
IWRGDMIPASRSEYQRIQQQLETERFPPAQPGWNHRAFHELNKEEQAQAEKKRLQEYCRK
AYKKIKETRTEERWQTICQRENSFYVNTVRSFRDRRYEYKGLLKVAKKQLSEAQEKGDPG
EVKAANARAVLYDSLQLAHKCILNSFYGYVMRKGSRWHSMEMAGIVCYTGATIITRSREI
VEQIGRPLELDTDGIWCILPASFPENYVIKTNNPKKSKVTISYPGAILNVMVKDHYTNHQ
YHDLQNAEMLEYSVRSENSIFFEVDGPYQAMILPASKEEGKKLKKRYAVFNFDGSLAELK
GFEVKRRGELQLIKIFQSSVFEAFLKGDTLETCYASVAKVADYWLDVLYSKAANMPDSEL
FELISENRSMSRKLDEYGDQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGAPV
TERAIPLAIFQAEPSVKHHYLRRWLKDPSITNFDIRNVLDWEYYIERLSGTVMKIITIPA
ALQGVPNPVPRVAHPDWLHKKVLERNDTFKQRRITDMFNVAPKPKPQPKVQTEDDNSQDL
FASQAAPDIEDILTPQSQNPRVGPTVTSNKRKRTSDMTEDSNDMTKSWRDVLGNPPSMGN
SKEEMAAWITFQKKKWDFQRLQRESRSKRLRTGDCPTMGTSVGSGAGRVVRSGPTSTLGG
FLRKAQRTLLDVPWQLIQLAETNTAGQFKLWALVGNDLHLIKLVIPRIFYVNQRVPKLAN
ESEGVWRKANKTLPRSHPVFNLYEYTVPEEVFREHSNELMADLSTPDIEGIYETQVPLDF
RAIAQLGCVCVVDKFLARADTDTFELGQLKFKTVAQYQYLETGSLHHVYLYHHRSGNKAM
FGIFFNHSKKGHIFVLDTVRSNQMPNLNTLFNNERNAKINKGFEEIQLPESNYTFEIKFE
TELRPVYRQIQRLLQAYREEKKGPTFLAIQSPHDLTTITTLMPGLGEFPQVPIHVTEVEN
LYNVLDWQRVGAKAMVRQYLGLKQLLHTAMEQSRYFHVPVGNLPRDTTAFGADLFYFRHL
QKHNSVVWCSPGQRPDLGGHEHDDNRLVAELEEAASVAQLNNPGCYSTVCVELDLDALAV
TTLLQSHHINEMEGTSSSVAFDAAPQASLQDMMGGAESSLTSYDETARCAAAFRILRQMV
AAWLRDVSLYQNVFADFQIIHFYRWLRDSGSLLYDPALHRILHNLMHKLFLHLVAEFKRL
GSVIIYANFNKIVLCTKKRRVDDAIAYVQYVVNSIRGKELFHSVDISFNQCWEYLMWLDP
ANHGGIKGKLPKDISSSQDEKGNESEDDEEENQQGTENEGERGEDEGPVIEMNWNMAEYL
PEWCGCQSSFNNVVASYMNAVYEKLQEESGRYTPGNTPVKRKVSSQATRKPQEALQGYVD
FAQELISGELAQKLYFITQKIQKKGTREEEEEDPNVLMIAPDIHTTPALEFVKSITKVLS
LDPVVSEQVCKLRRDLLKLLNIGEFSPEAEWKDPCISYTLPEVICRSCNHCRNIDLCKDP
HHAVENGVRVWLCPVCNTSYASGEIEHYLIGLIHTNSMAYVLQDLQCDRCSEVKQPNMTL
YCTCGGRFKTLHKRDDFSHKLRIFKKIASYFSMPLLKETVEWIISNNSWIKQ
NT seq 6819 nt   +upstreamnt  +downstreamnt
atggtgcttcagaattcaggaaaattccggtcagagagatttgagaggaaaaaggacgac
gatccgagtgccctagatgatggctcagacagaaggcttcaacagagcattgagaatgat
aacgttgattccaaatatggattcaaccgctacaaggagccacaggagcgggtgggatgg
ctcctcaacatgcatcctacggaaattctggacgaggacaagaggcttatgagtgctgtg
gattattacttcatacaagaagatgggtccagattcaaggtgtctcttccatatcggccg
tacttctttgtaatgaccaaaaaggaagtgatccaggatgttacaacatttttgactaaa
aagtttgctggtcttttggcctctgttgaagttgtaaggaaggaggacttggatttggat
aatcacttgacaggcttgaagcagacgttattaaaattatcatttctcactgtaaatgac
ttagtaaaggtacgtcaaaccatttctggagctgtaaaaagaaataaggaagcagccaag
tctaagacagtgtatgcagaaatgctgttagctcatgcaagtgaatcaggtgaatcgggg
aagaagatgcaggatcattttgaaaatcttcttgatattagggagtatgatgtaccatac
catgtgagagtatcaattgactgcaagatttttgtgggattatggtactctgtcaaaggt
gggggtacaggccctcccattataacacgccgtgaagacctgctggtgtggcctgattgt
attgtacttgcttatgatattgagaccacgaaactgcctctcaagttccctgatgcaaat
actgatcagattatgatgatatcatacatgattgatggacagggttatcttataacgaat
agagaaattattagtgaggatgtggaagacttcgagtatacaccacgagcagagtttgaa
ggtccattcattatttttaatgaagctaatgaaatggctactattcagagattctttgat
catattctagaggtgaagcctcatatatttgtgacttacaacggagacttctttgactgg
ccgtttgtggaagctcgagcagctttccataacttagacatgttcagagaaatcggattc
tccaagaccagagagggtgtctacttttcacgtcctgcgatccatatggattgtctgtgc
tgggtaaagagagattcctacttgcctgttggttcgcatggcctaaaagctgttgccaag
gccaagctgcgatatgatccagttgaattagatccagaggatatgtgttcattggcggct
gaacaaccacaggttcttgccaattactcagtgtcagatgcagtggccacatactacttg
tacatgaaatatgtccaccctttcattgtggctctgtgtaccattattcccatggagcca
gatgaggttctccgcaaaggttctggaacgctgtgtgaagcactgttgatggtgcaagct
taccatgccaacattgtttatccaaataagaaagtcgcagagctgaataaactttcatcc
gatggccatgtgattgactccgaaacttacgttggagggcacgtagaagccattgagtca
ggagtgttccgtgccgatattccttgcagatttcgaatggttccagaagcttttcagaag
ttaatggacaatgtggatcgcactataaaattctgtgttgaagtggaagaaggcattcct
ttagatcaagtgatcaattatgatgaggtagttgaagatatcaagacaaagttagccgac
ttgcgggacactccatgccgtttagagaaccctctgatctaccatctcgatgtaggagct
atgtatcctaacattatcctcacaaatcgactccaaccttctgctatggtggatgaaact
gtttgtgctgcctgtgattttaacaaacctggagcaacgtgtcagagaaagatgtcatgg
atctggagaggagacatgatcccagcctcccgtagtgaatatcagcgcatccagcagcag
ttagagacagaaagatttccaccagctcagcccgggtggaaccacagagctttccacgag
cttaacaaagaggaacaagctcaagcagagaagaaaaggctgcaggaatattgccgtaaa
gcttacaaaaagataaaagaaaccagaacagaagaacgttggcagacaatttgtcagcga
gaaaacagcttctatgtcaacactgtaaggtctttccgagatcgtcgttatgagtacaaa
ggtcttcttaaggttgcaaaaaagcagctatctgaggcacaagaaaagggagatccaggt
gaagtcaaagctgccaatgctcgcgctgtgttgtatgactccttgcagttggctcacaag
tgtatccttaactcattctatggttacgtcatgagaaagggctctcggtggcactcaatg
gagatggctggaattgtgtgttatactggagctaccattattactaggtcaagggagatt
gtggaacagattggtcggcccttggaacttgacaccgacggtatctggtgtattctccca
gcatcattccctgagaattatgttatcaaaacaaacaaccctaagaagtcaaaggttacc
atatcatacccaggtgccattctcaatgtaatggtgaaggatcattacacaaatcaccag
taccatgatctgcaaaatgctgagatgctggagtactctgtcagatcagaaaattctatt
ttctttgaggttgacggtccctaccaagcaatgattcttccagcttccaaagaggagggc
aaaaagctgaaaaaacgttatgcagtgttcaacttcgatggctcgttggctgaattgaaa
ggcttcgaggtgaagcgtcgtggagagctgcagctcattaagattttccagtcttcagtc
tttgaagctttcctgaaaggagacacactggaaacctgttatgcaagtgttgcaaaggta
gcagactattggctggatgtgctgtacagtaaagcagccaacatgcctgactccgaactg
tttgagctcatttcggagaatcgttcaatgagcaggaaattggatgagtatggggaccag
aagtcaacctccatatccacagctaagaggctggcagagttccttggtgatcagatggtg
aaggatgctggtctcagctgtagattcatcatttcaaagaagccagaaggagcccctgtt
actgaaagagctattccacttgccatcttccaagcagagccatcggtgaaacaccactat
ctgcgtcgctggctaaaagatccatccatcacaaactttgacattcgaaatgttttggac
tgggaatactacattgaaagactctcaggaacagtaatgaagatcattacaatcccagct
gcccttcagggtgtgccaaatccagtacctcgtgtagctcaccctgactggttgcataaa
aaggttcttgagagaaatgacacctttaagcagcgtcgtattacagacatgtttaatgta
gccccaaaaccgaaacctcagcctaaggttcagactgaggatgacaattcacaagatttg
tttgcatcacaagcagcccctgatattgaagacatactgactccacaatcacaaaatccg
cgggtaggaccaacagtcacaagtaacaagcggaagaggacatcagacatgactgaagat
agtaatgatatgacaaagagttggagagatgtcttgggaaacccgccaagcatgggaaat
tcaaaggaggaaatggcagcatggattacattccaaaagaagaaatgggacttccaacgg
ctccagagagaaagccgatctaagagacttcgcaccggagattgcccaacgatgggtaca
agtgtagggagcggtgctggccgtgtggtgaggtctggcccaactagtacccttgggggc
ttcttgcgcaaggcacaacgcaccctactagatgtcccttggcagcttatacaactagca
gagactaatacagcaggacagtttaaactgtgggcactggttggcaatgatctccatctc
atcaagcttgttattccccgaatcttctatgttaaccagcgtgttcccaaattagctaac
gagtcggagggagtgtggcgcaaagcaaacaagactctccccaggtcacatccagtgttt
aatctttatgaatacactgtcccagaggaagttttccgtgagcacagcaatgaacttatg
gctgatttgtcaactcctgatattgaaggaatctatgaaactcaggttccactggatttt
agggcaatagctcaactaggctgtgtatgtgttgttgacaaattcctagctcgtgcagac
actgacacgtttgaattgggtcaactcaagtttaaaacagtggcacagtatcagtaccta
gagactggcagccttcaccatgtttacttgtatcatcataggagtggaaataaggccatg
tttggtatcttctttaatcacagtaagaaaggccacatttttgtattagacacagtacga
agtaatcagatgcccaatcttaataccctgtttaacaatgagagaaatgccaagatcaac
aaagggtttgaggaaatccaactcccagagtctaactacacctttgagatcaaatttgag
actgagctgcgtccagtttatcgccagattcagcgtctgctccaagcttatagagaagag
aagaaagggccaacttttttggccattcaatcacctcatgatcttaccacaataacaacc
cttatgcctggcctgggagaatttccacaggtgcctattcatgtcacagaagttgaaaac
ttgtacaatgtacttgactggcaacgtgttggtgcaaaagccatggtacgacagtacctg
ggcttaaagcagttgctgcacacagccatggaacagtctcgttactttcatgtgcctgtt
ggaaatttgcctcgagataccacagcctttggagcagatctgttttacttcagacatctg
cagaagcacaactcagttgtgtggtgttcacctggccaaaggcctgatctgggcggtcac
gagcatgatgataatcggcttgtagcagaattggaagaagctgcctcagttgcacagctt
aacaacccagggtgttattctacagtctgtgttgaactggatttagatgctctggctgtc
actacattgttacagtcacatcacatcaatgagatggaagggaccagcagtagtgtagcc
tttgatgctgctccacaggcttcactccaggatatgatgggaggtgctgagtcctctctc
acatcctatgatgaaactgcacgttgtgctgcagccttcagaatattaagacagatggta
gctgcttggcttcgtgatgtttcactctaccagaatgtgtttgcagatttccagatcatc
cacttttatcgatggctgagagattctgggtccctgctgtatgatcctgcacttcatcgc
attctacataatctaatgcacaagctattcctccatctggttgcagaatttaagcgttta
ggctctgtcattatttacgccaacttcaacaaaattgttctctgcactaagaaaagaaga
gtagatgatgccatagcatatgtgcaatatgtggtaaacagcatcaggggtaaggaatta
ttccattctgttgatatatccttcaaccagtgctgggaatacctcatgtggttagaccct
gcaaatcatggtggtattaaaggcaagcttccaaaagacatatcttcttcacaagatgag
aaaggtaatgaatcagaagatgatgaggaagagaaccaacaggggactgaaaatgaaggt
gaaagaggggaggatgaaggaccagtgatagagatgaactggaatatggctgagtacctc
ccagaatggtgtggatgccagagcagcttcaacaatgtggttgcctcttacatgaatgca
gtgtatgagaaactgcaagaagaaagtggtcgttacacaccaggcaacacccctgtgaag
cgcaaagtttcaagccaggccacgagaaagccgcaagaggcacttcaaggttatgtagac
tttgcccaagaactaatttcaggagaattagcacaaaagttatatttcattacacaaaag
atacagaagaagggaacgagagaagaggaagaggaggatccaaatgtcctcatgatagct
cctgacattcacaccactccagctttagagttcgtcaaaagcatcaccaaagtcttgtca
ctggatcctgttgtttcagagcaggtgtgcaaacttaggagagaccttctgaaattactg
aacataggcgagttttccccagaggcagaatggaaggacccttgtatctcgtacactcta
cctgaagtgatttgtcgatcttgtaaccattgcagaaatattgatctctgtaaagatcca
caccatgcagttgaaaatggagtgcgagtctggttatgtcctgtttgcaacacaagctat
gcttcaggtgaaattgaacattatttgattggcctgatccatacaaattccatggcatat
gtgcttcaagatcttcagtgtgatcgttgttcagaggtgaagcagcccaatatgaccctc
tactgtacatgcggagggcgcttcaagacactccacaagcgtgatgattttagccacaaa
ttaaggatattcaagaaaatagcatcatatttctcaatgccattgctaaaagaaactgtt
gaatggattatctccaataattcttggataaaacagtaa

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