Penaeus monodon (black tiger shrimp): 119574341
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Entry
119574341 CDS
T08784
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119574341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119574341
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119574341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
zf-RING-like
zf-HC5HC2H
PHD_NSD
T5orf172
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119574341
NCBI-ProteinID:
XP_037777465
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All DBs
Position
6:complement(21359902..21362922)
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AA seq
264 aa
AA seq
DB search
MSDGEVVEDFYGVYLLYCINPQYKGRTYIGFTVDPNRRIKQHNRGVRAGGAYKTSNRGPW
EMVLIVHGFPNDISALRFEWAWQHPERSRRLRGMGRKKAKETKYEYCLRILATMLQTKPW
SRLPLTLRWLKQQYFKEFPAGMEAPNHMPIAYGPVKPAKVRKNEEEQEIEVLEVTCLLCD
DAVTQTEKMRCLSTSCQLNAHVRCLAQHMLHGEPPGTLLPLEGPCPSCGSVLLWGDLVRL
KRGCYQQEEEEVEDHWVETLSQAV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatggtgaagttgttgaagatttttatggagtttacttgttgtactgcataaat
ccacagtacaaaggacgcacatatattggcttcactgttgaccccaatcgtcgtatcaag
cagcacaaccgaggtgttagggcaggaggtgcatataaaaccagcaacagggggccctgg
gaaatggttcttattgtccatggatttccaaatgacatatctgccctcagatttgaatgg
gcctggcagcatccagaaagaagtcgtcggttgagaggtatgggccgtaaaaaagcaaaa
gaaacaaaatatgaatattgtctacggattctggcaactatgttacaaactaaaccttgg
tctcgtctgcctcttacacttagatggctcaaacaacagtacttcaaagaatttcctgca
gggatggaggcccccaatcacatgccaattgcttatggtccagtaaaacctgcaaaagtt
agaaagaatgaagaggaacaagaaattgaagttttggaggtgacatgcttgctgtgtgat
gatgcagtaacacaaacagaaaaaatgagatgtttatctacctcatgtcagttaaatgct
catgtcagatgccttgcacaacatatgctacatggagaaccaccagggactctgcttcct
ctagaaggcccatgtccaagctgtgggtctgtattgctatggggtgaccttgtaagactg
aagcgcggatgctatcagcaagaagaggaggaagtggaagatcattgggttgagacttta
agtcaagctgtataa
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