Penaeus monodon (black tiger shrimp): 119574676
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Entry
119574676 CDS
T08784
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119574676
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
119574676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
ARM_TT21_5th
TPR_7
TPR_Slam
ANAPC3
ARM_TT21_4th
TPR_9
TPR_6
PknG_TPR
TPR_MalT
TPPII_C
Motif
Other DBs
NCBI-GeneID:
119574676
NCBI-ProteinID:
XP_037777993
LinkDB
All DBs
Position
6:complement(56658323..56666792)
Genome browser
AA seq
1172 aa
AA seq
DB search
MSGCIEIPLRDSDEVIELDLESLPEGDEVLGILTNEKVPLNYWVDLAVEYYKQKKEEDFV
RILEASRTDANTMYRESEKDQMRSYDTLAAYYVQLANKEKDKTAKKELFQKATYLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSANNIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQDKARLAFERALELDGMCVGALVGLAVL
ELNEKKPENIRRGVQMLSKAYNIDSTNPMVLNHLGNHFFFKQDFQKVQHLALHAFHNTEN
ESMRAESCYQMARAFHVQEDYSQAFQYYYQATQYAAPNFVLPHYGLGQMYINRGDTENAA
QCFEKVLKAQPGNYETMKILGSLYASSTSQSKRDLAKQHLKKVTEQYSEDVEAWIELAQI
LEGSDLQGSLSAYHKATKLLQDLVQMDIPPEILNNIAALHFRLGNYEEAQKYFKEAWERC
DAEKDQDPQYYSSISVTIKYNTARLHEMFCQFDKAEKLYKEILQDHPNYVDCYLRLGCMA
RDRGQIYDASDWYKEALRMNNEHPDAWSLMGNLHLAKNEWGPGQKKFERILKNPSTTNDS
YSLIALGNVWLTTLHQPNRDKEKEQKHQDRALAMYKTVLRSDPRSIWAANGIGAVLAHKG
YINEARDIFAQVREATADFSDVWMNIAHIYVEQKQYINAIQMYENCQKKFFKYPNVEVLG
YLARAYFKAVKLKEAKYTLLKARHVAPHDTVILYNLALVLQRLATQVLRDEKSNLKTVLA
AVHELTLAQKYFQHLSVNGDRLKYDLGAAAAEASQCRDLLSQAQYHVARARRQDDEEKAL
RRKQDEERQALKQKVVEERQKMEERRRLMIEERMKAREQYKEKMKNAVIINEPVEPARKG
GRGRKRDVEILSDGSGGGSGPEGESRPKKGRGRKKKEPGERKKRGRKSKQGSDDEDDDQP
RGRKRGKGGAKGRKKASEDGLSAKQKGRIVSKATISDSSDDSDNERLKIASGSDSEGGKS
KRRRVMSNSDSSRSRSRSRSGSRKSSRSRSRSKSGSRSRSRSKSGSRSRSRSGSRRSGSG
SRSRSRSRSRSGSRSPARSRSGSRSPAKSRSRSRSGSRSKSRSRSRSRSGSPRSRSGSRS
PARSGSGSPRSRSGSRSPAKSGSEVGRASDSE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttgtatcgaaatcccgctacgggatagcgatgaggttattgaattggatttg
gaatctttacctgagggagatgaagtgctcggcattctcaccaacgagaaggtcccactc
aattattgggttgaccttgctgttgagtactataaacaaaagaaggaagaggactttgta
cgtatcttggaagcaagcaggacagatgccaacaccatgtacagagagtctgagaaggat
cagatgcggtcatatgacacactggcagcctattatgtgcagttggccaacaaagagaaa
gataagactgcaaagaaggaactgttccagaaagcaacttacctttacacaacagcagat
aaaatcattatgtacgaccagaatcatctcttgggccgagcatacttctgtttgctggag
ggagataagatggaacaagctgatgcacagttcaacttcgtactcaatcagtctgccaat
aacatcccatctttgttaggcaaagcgtgtattgctttcaacaaaaaggattatagaggt
gctttggcattttataagaaggctttgcgaacaaatcccaattgcccggctgctgttcgg
cttggtatgggccattgctttatgaaactgggaaaccaagacaaggctcgtttggccttt
gagcgggcattggaattagatggaatgtgtgttggagctcttgttgggttagcagtgtta
gaactcaatgaaaagaaaccagaaaacattcgtagaggagtgcagatgttgtcgaaagca
tacaacattgattctacaaatcctatggttttaaatcatctgggtaaccactttttcttc
aaacaggactttcaaaaagtacagcaccttgctctccatgctttccacaacaccgaaaat
gaatctatgcgtgctgagtcatgctaccagatggctagagcatttcacgtgcaagaagat
tactcacaagccttccagtactactaccaggccacccagtatgcagcgccaaactttgtt
ctaccccattatggtcttggtcagatgtatattaacagaggagatactgaaaatgctgct
cagtgttttgaaaaagtactgaaagctcagccaggtaactatgaaaccatgaagatcctt
ggttctctttatgccagctcaacatctcagagtaagagagatttggctaagcagcatctc
aaaaaggtgacagagcagtacagtgaggatgtggaggcctggattgaacttgcccagatc
ttagaaggcagtgacctccagggatccttgtctgcataccacaaggccaccaaactcttg
caagaccttgtgcagatggacatccctccagaaattctcaacaatatagctgctcttcat
ttcagactcggcaattacgaagaagcccagaagtacttcaaggaagcctgggaacgctgt
gatgcagagaaggaccaggatccacagtactattcctccatttctgtcaccatcaagtat
aacactgcacgtcttcatgaaatgttctgccagtttgacaaggcagaaaagctctataag
gaaattcttcaggatcatccaaactatgtggattgctatctaagactgggttgtatggca
agagaccgtggccagatttatgatgcttctgattggtacaaagaagccctgcgtatgaac
aatgaacatcctgatgcctggtccttgatgggaaaccttcatctggccaagaatgaatgg
ggtcccggacagaagaaatttgaacgtatcttgaagaatcccagcaccacaaatgactcc
tactccctcattgccttgggaaacgtatggctaacaacactacaccagccgaaccgtgac
aaggaaaaggagcagaagcaccaggaccgagcccttgccatgtacaaaactgtccttcgt
tctgacccaagaagtatctgggctgctaatggcattggtgctgtattggctcacaaaggt
tacatcaatgaggcacgtgatatatttgcccaggtgcgagaggcaacagccgatttcagt
gatgtctggatgaatattgcccacatctatgtagagcagaaacaatatattaatgctata
cagatgtatgaaaattgccagaaaaagttcttcaagtatccaaatgtagaggttcttggg
tatcttgctcgagcatacttcaaggcagtaaagctgaaggaggccaagtatacacttctc
aaggctcgtcatgttgctccacatgataccgtcatcctgtacaacttggcactggtgttg
caacgactagccacacaagtgcttcgtgatgaaaaatccaacctgaagactgtgttagca
gctgtacatgagctaacattagctcaaaagtacttccagcatctcagtgtcaatggagat
cgtctgaaatatgacttgggggctgcagctgcggaagccagccagtgccgtgacttgctc
tctcaggctcagtaccacgttgctcgtgcccgcaggcaagatgatgaagaaaaggcactc
aggcgtaagcaggatgaagaaaggcaagctctcaagcagaaggttgtggaggagagacag
aagatggaagagaggaggaggctgatgatcgaagagaggatgaaagctcgagaacagtac
aaggagaaaatgaagaatgctgtcatcataaacgaaccagtcgaacctgcaaggaaagga
ggaagaggcaggaagagagatgtggaaatcctctcagatggatctggtggaggaagtgga
cctgagggggagagccgacccaagaagggcagaggaaggaagaagaaggaaccaggggaa
aggaaaaagcgaggcaggaaaagcaagcagggaagtgatgatgaggatgacgaccagccc
cgaggccgcaagagagggaagggaggagccaagggcaggaagaaggcctcagaagacggc
ctttcagccaagcagaagggacgtattgtgtccaaggcaaccatttcagactcctcagat
gactcggacaacgagcgcctcaaaattgccagtggatcagatagtgagggtggaaagagc
aaacgtcgaagggtcatgtcaaattcggattcctcgaggtctcgctccaggtcaagatct
gggtcaaggaagtcctcacgatcaaggtcacgttccaaatctggatcaaggtcacgctca
aggtcaaagtccggctctcgctccaggagtcgcagtggatccaggagaagtggctcagga
tcgcgatccaggtcacgcagtcgttctcgttctggtagcagatccccggctagatcaagg
tctggttcacgttccccagcaaaatcacggtcaaggtcaagatctggatcgaggtcaaag
tcaaggtcacgttctaggtctagatccggctcgcctcgctctaggtccggctctcgctca
ccagccaggtcaggctcagggtctccccgctccaggtctgggtcacgctcccctgctaaa
tccgggtcagaagttggcagggcgagtgacagtgagtaa
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integrated database retrieval system
