Penaeus monodon (black tiger shrimp): 119574908
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Entry
119574908 CDS
T08784
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119574908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119574908
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119574908
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Paralog
GFIT
Motif
Pfam:
PRP38
Peptidase_M26_C
Motif
Other DBs
NCBI-GeneID:
119574908
NCBI-ProteinID:
XP_037778107
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Position
7:complement(<212516..217860)
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AA seq
265 aa
AA seq
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MQRNSNVATPLYMEWMIQANSPRVPTPTGSAWARSPRSVLLRFLRAIPLRRQRRRLGQSE
PRDIHLSQSESRSSPSTVSLLRREIVASQELALRESVFGKICEIFGEMKAGAYEYEEDGE
KGAANKKPNGLPIWGNEKSMNLNPLILTNIQSSQYFKVNLYQLKTYHEVIDEIYYNVTHL
EPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTAFCILYKLYTLRLTRKQVTGLLNHSDSPY
IRGLGFMYIRYTQPPADLWDWFEPY
NT seq
796 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaacagcaacgtggcaacacctctttacatggagtggatgatacaagccaac
tccccccgtgtcccaacacctacaggaagtgcctgggctcgtagccctcgctccgtatta
ttacgttttctacgagcgattccgctaagacgtcagaggaggcgcctcggccaatcagaa
ccgagggatatccacctcagccaatcagaatcgagatcgtcgccatcaacggtatccttg
ttgagaagagagatcgtggcatcgcaagagctagccctccgtgaaagtgtttttgggaaa
atttgcgagatttttggggaaatgaaggcaggagcttatgagtatgaagaggacggtgag
aagggtgcggcaaacaagaagccaaatggactacccatctggggcaatgagaagtccatg
aacctgaaccccctcatcctaaccaacatccagtcctcgcagtatttcaaagtgaatttg
taccagctgaaaacctaccatgaggtgattgacgagatctactacaatgtgactcacctt
gagccctgggagaagggcagtcgcaagacctcaggccaaactggaatgtgtgggggggtg
cgaggtgtgggtgcaggaggcatagtctctactgccttttgcattctctataagttgtac
acactccgactcacaagaaaacaggtgactgggttactgaatcacagcgattctccatat
attcgtggtcttgggtttatgtacataagatacacgcagccaccagcagacctgtgggac
tggtttgaaccatact
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