Penaeus monodon (black tiger shrimp): 119574928
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Entry
119574928 CDS
T08784
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119574928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119574928
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119574928
Complex C
U4/U6.U5 tri-SnRNP related factors
119574928
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
119574928
NCBI-ProteinID:
XP_037778129
EnsemblRapid:
LOC119574928
LinkDB
All DBs
Position
7:202033..206668
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AA seq
415 aa
AA seq
DB search
MKAGAYEYEEDGEKGAANKKPNGLPIWGNEKSMNLNPLILTNIQSSQYFKVNLYQLKTYH
EVIDEIYYNVTHLEPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTAFCILYKLYTLRLTRK
QVTGLLNHSDSPYIRGLGFMYIRYTQPPADLWDWFEPYLDDEEEIDVRAGGGQTITIGQV
VRHMLTKLDWYSTLFPRIPVPIQKDLDNKLGERASSRPALSAAAPPKTERYAGRGEAEPP
AKEGSRVYEAENREYNSRERGVAKERDRDYDRERDRERDRDYERDRGKERDHDKEKERDG
DKRKERSHEKSRDHPRERNGDCDRGRDRHRDRERDHHDRHRNRDKDRRRSRSRSHDRKHR
HHHDRYAEDRGHRDFADLLEREKHRIKKEKKTDGSRDHYHRSRSRSRDRDRRHRY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggagcttatgagtatgaagaggacggtgagaagggtgcggcaaacaagaag
ccaaatggactacccatctggggcaatgagaagtccatgaacctgaaccccctcatccta
accaacatccagtcctcgcagtatttcaaagtgaatttgtaccagctgaaaacctaccat
gaggtgattgacgagatctactacaatgtgactcaccttgagccctgggagaagggcagt
cgcaagacctcaggccaaactggaatgtgtgggggggtgcgaggtgtgggtgcaggaggc
atagtctctactgccttttgcattctctataagttgtacacactccgactcacaagaaaa
caggtgactgggttactgaatcacagcgattctccatatattcgtggtcttgggtttatg
tacataagatacacgcagccaccagcagacctgtgggactggtttgaaccatacttagat
gatgaggaggaaatagatgtgcgtgcaggagggggtcagaccatcaccattgggcaggtt
gtgcgtcacatgctcaccaaactagactggtactccaccctctttccaagaatccccgtg
cccatccagaaggacctggacaacaagctgggagaacgtgcttcatccagaccagctctg
tctgctgctgctcctcccaagacagagaggtatgcaggccgaggggaagcggagccccca
gccaaggaaggcagccgtgtatatgaagccgagaatagagagtataattcaagggaacga
ggtgtagcgaaagagagagacagagactatgacagggaacgggatcgcgaaagggacaga
gattatgagcgagaccgagggaaagagagagatcatgataaagagaaagagcgagatggt
gacaaacggaaggagaggtcacatgagaagtcaagagatcaccccagggagaggaatggt
gactgtgacagaggtagagacaggcatcgggacagagagagagaccaccacgaccgtcac
agaaatagggacaaggacaggaggaggagcagaagccgcagccatgacaggaaacacagg
caccatcatgacagatatgctgaagacagaggtcacagagactttgctgacctcctcgag
agagaaaaacatcgcatcaagaaggagaagaaaacagatggcagtcgagatcactaccac
agaagtcggtctcggtcccgcgacagagacagaaggcatcggtattaa
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