Penaeus monodon (black tiger shrimp): 119574953
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Entry
119574953 CDS
T08784
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119574953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119574953
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119574953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
BAR
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
119574953
NCBI-ProteinID:
XP_037778168
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Position
7:1468001..1489130
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AA seq
636 aa
AA seq
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MACRRDINPGNAKRKHTGSSRKPRSEELKDFTKDMSLVRSCDFGFGTTNTGGSTAPSGGG
FTFGATNPGTTTAQGFAFGTATTTGTSTGTTGFSFGNPSTAGAATGTTGFNFGSATNPTT
SASPFGATFGTAAPATTATTQGFGFLTNFGGSGGGGGGAGGGSGFPKPATSFGPGGFGSL
TNTVPGTGFSFSGGSNQPAKAYNFGAPTTSNASGGFGLLGSSFGVKPTTGFPAQTSDASQ
LQQGALGQPDPSLALHLAICTPSYFNNENDEVLRKWNQLQAFWGAGKGYYAPNMPPVEFT
PENPYCRFKAVCYARIPDYRNEDGHVQVNIGKPLSEVEQHKQQIVTTLTTLFNGAEVVVE
EVFAAKGPNQTVLHMQVLQPLPNGGKQKAPSSDVYRHMAAPTSAETVKSLCIQDVIPLVS
LTEKQMKEYLDTPQRGIDPALWEQAKRENPDPKKFFPVVKVGFQELQMQFKEQEQHAEKL
QTSMKEVTDAITQLKHKQAMVKAAIQNAKWKQANLMRRVLKLVSAQEVERKRGVPLDQTE
EQIRMRLEDLYVQLMQPTQYRGCLNELMAQMSVKPSGSKGCPRYGLVNDKGKGPLAVYLL
AAGSTQCGCHGPEGGPADCRQYGGRTTKKVLGLGVS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcagaagagacataaaccccggtaatgcaaaacgaaagcacactggttctagt
aggaagccaagatcagaagaactcaaagatttcaccaaggatatgtcattagtgcgttcc
tgtgattttggatttggtacaactaatactggtgggtcgacagcgccaagtggaggcgga
ttcacttttggggcaactaatccggggacgacgacggctcaaggctttgcttttggaacg
gcgacaaccacgggcacatcgacaggaacgacaggtttctcgtttggaaaccccagcacg
gcaggggcagcaacaggaacaacaggatttaacttcggctctgctaccaaccccaccaca
agcgcttctccttttggtgcgacctttggcaccgctgcaccagccaccacagccaccacg
caagggtttggctttctgactaactttggtggtagtggaggtggtggaggaggtgcagga
ggcggcagtgggtttcccaagccagcaacctcctttgggccaggaggctttgggagcctt
actaatacagtgcctggaacgggcttcagcttcagtggcggctccaaccaacccgccaag
gcgtataactttggagcccccacgacttccaatgcctcaggcggctttgggctcctgggc
tccagctttggagttaagcctactactggtttcccagcacagacctcagatgcgtcacag
cttcagcagggtgctctggggcagcccgacccctcgctggccctccacctggccatctgc
accccttcgtacttcaacaacgagaacgatgaggtgctgcgcaagtggaaccagctgcaa
gccttctggggcgctggaaaaggctattatgccccgaacatgcccccggtggagttcacg
ccagagaacccttactgccgcttcaaggccgtctgttatgcacgtatcccggactaccgc
aatgaggatggccacgttcaggtcaacattggcaagccgctttccgaagtggagcagcac
aaacagcagattgtgacaaccctgacgacactcttcaatggggcggaggtggtggtggaa
gaggtgtttgcagcgaaaggccccaatcagaccgtccttcacatgcaggtcttacagcca
cttccaaatggtgggaaacaaaaagcgccgtcgtcggatgtgtatcgtcacatggcagcc
ccgaccagtgcagaaactgttaagagcctgtgcattcaggacgtgatcccactagtgtcg
ttgactgagaagcagatgaaggaatatctcgacactccacagaggggcatcgaccctgcc
ctgtgggagcaggccaagagggagaacccggaccccaagaagttcttccccgtggtcaag
gttgggttccaggagctacagatgcagttcaaagagcaggagcagcatgcagagaagctg
cagaccagcatgaaggaggtcacggacgccatcacgcagctcaagcacaagcaggccatg
gtgaaggcggccatccagaacgccaagtggaagcaggccaacctcatgcggagggtactc
aagctggtgtcagctcaggaagtagagcgcaagagaggagtgccacttgatcagacagag
gagcagatccgcatgcggctggaagacctgtatgtccaacttatgcagcctacacaatat
aggggatgtctcaacgagctcatggcccagatgtcggtgaagccgtctggctcgaagggt
tgccctcgctacggccttgtgaacgacaagggaaaaggacctctcgcagtatatctcttg
gcagcaggaagcactcaatgcggttgtcatggtcctgaaggaggacctgcagattgtaga
cagtatggcggaagaactacaaagaaagtcttagggctgggagttagttag
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