Penaeus monodon (black tiger shrimp): 119575478
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Entry
119575478 CDS
T08784
Name
(RefSeq) DNA polymerase delta catalytic subunit-like isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03410
Base excision repair
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
pmoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119575478
03410 Base excision repair
119575478
03420 Nucleotide excision repair
119575478
03430 Mismatch repair
119575478
03440 Homologous recombination
119575478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119575478
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119575478
Enzymes [BR:
pmoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119575478
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
119575478
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
119575478
MMR (mismatch excision repair)
DNA polymerase delta complex
119575478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
119575478
NCBI-ProteinID:
XP_037779051
EnsemblRapid:
LOC119575478
LinkDB
All DBs
Position
7:55486006..55492494
Genome browser
AA seq
1098 aa
AA seq
DB search
MDQKRPHPNGGKAGPPKKIRGDEDDEMDFDDEFPDDYDMEQFDEQDFTDAQGVKVVDDED
TDSSWGRPPLPSINPATENLVFQQIDIDHYIGPPCEGMPGQQAGKVPIMRMFGVNDNGNS
ICCHVHGFSPYLYVTCPPIFKESHLGAFKDALNRVMIADMKSNKENITDAVLAVDLTKKE
SIYGFHGNKKVPFLKITLALPRLIAAAKRLLGEGKVFVSDIGTPAYEAYESNIDFEIRFM
VDTHVVGCSWIELPAGSWSIRKDRLDTRCQLEVDVAWNKFVSHAPEGEWARVAPFRILSF
DIECAGRKVYEKNGKYYWVFPEPDKDPVIQIGNMVIRQGEAEPFVQTIFTLKQCAPIVGS
KVKSYNVEKEMLDEWAKFVRTVDPDIITGYNINNFDMPYLLNRANHLKSEKFSFLGRIKS
IRSVIKESVLQSKQMGRRENKSINTEGRCQFDLLIVLVRDYKLRSYTLNAVSYHFLQEQK
EDVHHSIISELQNGNPQTRRRLAIYCLKDALLPLRLLDKLMCIINYMEMARVTGVPLSYL
LTRGQQIKVVSQLLRKAAEQDLVLPVHKSAGDDEYEGATVIEPRRGYYNVPIATLDFSSL
YPSIMMAHNLCYTTLLPSPAKASELGLGSDEFIKTPSGNYFVKSTKRKGLLPEILESLLA
ARKKAKNDLKKETDPLRKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTAFGR
MMIAFTKEQVEEKYTLENNYPSNAEVIYGDTDSVMVKFGVETVAEAMELGKEAAAYVTEK
FLKPIKLEFEKVYFPYLLINKKRYAGLYFTRPEIHDKMDCKGIETVRRDNAPIVANLINT
CLQKILIDRNPMGAVDYAKQTISDLLCNRVDISNLVITKELTKTEKEYAAKQAHVELANK
MKKRDPGTAPKLGDRVPFVIIAGAKGTPAYEKAEDPIYVLENSLPIDYEYYLTNQLSKPL
LRIFEPILGEKAESQLLKGDHTRSRIITHSKVGAMAKFITKKASCVGCKVPITSASEALC
KHCKMREGEIYMQHITTLGALEEKFARLWTQCQRCQGSIHEEVICTSRDCPIFYMRKKVQ
LELADQDKVIQRFGAPAW
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagcggccccatccaaatgggggtaaagcaggaccacccaaaaagataagg
ggagatgaagatgatgagatggactttgatgatgaattccctgacgactatgatatggaa
cagtttgatgaacaagatttcacagatgcacagggagtgaaagttgtcgatgatgaggac
acggatagctcttggggtcgccctccacttccctcaattaaccctgcaacggagaatctg
gtttttcaacagattgatattgatcattatattggaccaccttgtgaaggaatgccaggg
caacaggcaggtaaagtgcccatcatgaggatgtttggtgtcaatgacaatgggaactcc
atctgctgtcatgtgcatggtttctctccctacttgtatgtcacctgtccacctatcttc
aaggagtcgcacttgggagcatttaaagatgccctcaaccgagtgatgattgctgacatg
aaatcaaacaaggaaaacatcactgatgctgtccttgcagtcgacctgaccaaaaaggag
agtatctatggtttccatggcaacaagaaagtaccattcttgaagatcaccttagccttg
cccagacttatagctgcagcaaagagactccttggggaggggaaggttttcgtgtcagac
attggaactccagcttatgaagcctatgagtccaatattgattttgaaatcaggttcatg
gttgacacacatgtagtaggttgcagttggatagaactgcctgcaggctcctggtcgata
aggaaggacagactggacactcgctgccaactggaggtggatgtggcctggaacaaattt
gtatctcatgctcctgagggtgaatgggccagggtggcaccttttagaatcctctcattt
gacatagaatgtgcaggacgtaaagtctatgagaaaaatgggaagtactattgggtgttc
cctgagccagacaaggaccctgtgattcagatcgggaacatggtgataagacagggagaa
gctgagccgtttgtacagactatatttactctgaagcaatgtgctcccattgtgggctcg
aaagtcaagtcttacaacgtagagaaggaaatgttagatgaatgggcaaaatttgtaagg
actgttgatccagacatcatcacaggttacaacatcaacaattttgacatgccttatctg
ctcaatcgggcaaatcacctgaaatctgaaaagttctcgttcctcggcagaatcaaaagt
atcaggtctgtgatcaaagagtcagtgctacagagcaaacagatgggaagaagggaaaac
aagtcgatcaacacagaaggaagatgtcagtttgatcttctcatcgttttggtacgagat
tacaagctcaggtcctacaccctgaatgctgtgtcctaccatttcctgcaagaacagaaa
gaagatgtccaccattccatcatctctgagcttcagaatggcaatccacagacacgcaga
aggttagctatatactgcctgaaagatgctctccttcccttgcgtctgctggataaactc
atgtgcatcatcaactacatggagatggctcgtgtgacaggagtccctctctcgtacctc
ctcacccgtggccagcagattaaagtcgtgtcacagctgctgagaaaggcagcggaacaa
gaccttgtcctcccagtccacaagagtgcgggagatgatgagtatgaaggagcgactgtc
attgaaccccgcagaggctactacaacgttccgattgcaacacttgatttctcctctctg
tatccatccattatgatggctcacaacctgtgctacacaactctcttgcctagtcctgct
aaggctagtgagttaggactcggaagtgatgagttcatcaaaaccccatcaggaaactac
tttgtaaaatccaccaagaggaaagggctgctgcctgaaattctggagtcccttttggca
gcaaggaagaaggctaagaatgacctgaagaaggagactgatcctttgagaaagaaggtg
ctggatggtcgtcagttggccttgaagatatccgccaactctgtgtatggtttcacaggg
gctcaagtcggcaaactgccatgcttggaaatatctcagagtgtaacagcatttggacga
atgatgattgctttcacaaaggaacaggttgaggagaagtacactttggagaataattat
ccaagtaatgcagaggtcatttacggtgacactgactctgtgatggtgaagtttggcgta
gagactgtggctgaggctatggagctcgggaaggaggctgctgcttatgtcacggagaag
ttcctgaagccaatcaaacttgagtttgagaaagtttatttcccatatttgctgatcaac
aaaaagagatatgctggcttgtactttactcggccggagatccatgacaagatggactgc
aagggtattgagacagtgcgacgtgataatgcccccattgttgcaaatttgatcaacact
tgccttcagaagatcttgattgacaggaatccgatgggagcagtagactatgccaagcaa
acgatttctgaccttctgtgtaaccgtgtggatatctccaacctcgtcattacaaaggaa
ctgacaaagaccgagaaggaatatgcagccaaacaggctcatgtggaacttgccaacaag
atgaagaagagagatccaggcacggctccaaaacttggcgatcgagttccttttgtgatc
attgcgggagctaaaggaacacctgcttatgaaaaggcggaggaccccatttatgtgttg
gagaatagtttacccattgactacgaatattacctgaccaatcagctgagcaaacccctt
ttgcgaatttttgagcccatcctgggagagaaggcagaatcacagctgctaaagggagac
cacaccagatcgagaatcataacacacagcaaagtcggagccatggcaaaattcatcacc
aaaaaggcttcatgtgttggttgcaaagtcccaattacttcagcatctgaagcattatgt
aaacattgcaagatgcgggagggtgagatttacatgcagcacataacaactttaggagcc
ttggaagaaaaatttgcacgattgtggacacagtgtcagcggtgtcagggatccatccat
gaagaagttatctgcactagccgagactgtcctattttttacatgcgcaagaaagtacag
ttggagttggctgaccaagacaaagtgattcagagatttggagctcctgcatggtga
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integrated database retrieval system
