Penaeus monodon (black tiger shrimp): 119576060
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Entry
119576060 CDS
T08784
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119576060
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119576060
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119576060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
zf-C2H2_DHX34
nSTAND3
Herpes_ori_bp
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
119576060
NCBI-ProteinID:
XP_037779518
LinkDB
All DBs
Position
8:complement(1688392..1696557)
Genome browser
AA seq
1325 aa
AA seq
DB search
MGHSKHRDSSSESLEEKHRRKHKKKHRDSPSESSEEERSRKHKKRHWDSSSKSLEEERRR
RHKKRHRDSSSESSEEERRRKHKKKQRKKSKKHYKRDSSRERDRKRTRSSSESREESSLG
SYHQSIKRHKRSRSRMRSSSEESVPFNKKDEIKVKKEYEEREALKLSSDYNRKSEVKDTV
AQRCGDEVPGSSVKHEKNKITSSDSEDDLMFEWEHYRYEINQIFSNDDIIKRGTTEYDDF
WKFLKKYQGLQKQKTIRQMCGNKQYREETGAGEVSSVYRVPQHFDKRYNINFALTVTTDD
FQRRLPIRDLDEDKPSLSRKRLTELKFIILLYLDFLQKQRFEKLKKLRETQANLPISNYK
EEIISKVSSNNVVIIAGDTGCGKSTQVPQYLLAAGYSNIACTQPRRIACISLSKRVAYET
LNEFGSKVGYQIRFEKNKTEHTKIVFLTEGLLLRQVASDPLLSMYDVMILDEIHERHLHT
DFLLGVIKCLVMQREDIKVVLMSATINLDLFRNYFMGKAPVVQVPGRLYPIKLQYFPIPV
IEQASKSEKLNPAPYVRILQLIDKKYPDDERGDLLIFLSGMSEISTVVEAVKLYGQQTGK
WIVLPLHSTLSVSEQEKVFDVPPEGIRKCIVSTNIAETSVTIDGVRFVIDSGKVKEMSFD
AQSKMRKLKEFWISQASAEQRKGRAGRTGPGTCFRLYTDQEYSQFSQYSTPEIQRVPLDS
LVLQMISMGLPNVRLFPFIEPPAQEQLENAVQSLKAHAAITEAEGVTTIGNLLSQLPMDI
SLGKMLIMGSLFHQVEPVLSLAAAMSVQSPFTNRARRDPDCEAFIKTLQSDHGDPFTLLA
LYREWLYIKQNGHENSRKWCKRRGLEEQRFYEMTKLRHQFLQLLQESGLQEVAGCARAPL
TSAERAQRSGHLRQLHDLKRELYKDGPRKVKVLKVSHGEEVVSDEEDNRTDIKDVDFRIK
NDQKRLSEIYRSCKIHTLKDIIMMKIIICSGLYPNVAIADEHNNYKPGSEQLFHTFAKPF
TVLHPNSVFSSQPEVLQIADSDIIEYPGFSLRNPLCSKHQFLVYVSLLETNKPYLVDSVR
VPSAQVVLLFAQSIDTNADMTVIAFDNFIELKFPDAMSAQNLLFQAVQLRTKWKYLLDLR
IQISKPSIDNRDRLITDANKLEKDLSVGLIDFFLTDALYAKRRLLAADLAVLHVGPGSGD
CILSGNPFSKDASEPCQANNTKGGVDLTEYLTYNSLFDTECSVTTITSYDTVCPYCDKEL
HVTTLGRLSHMSLCLEGLLQSSENVDAEEENKGDDPTKKKFYCEVCQHTLWLGIKDIFKH
KKICK
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgggtcactcaaagcatagggactcgtcatctgagtcattggaggaaaaacatagaagg
aaacacaaaaaaaagcatagggactcaccgtctgagtcatcggaagaagaacgcagcaga
aaacacaaaaaaaggcattgggactcgtcgtctaaatctttggaggaagaacgtagaaga
agacacaaaaaaaggcatagggactcatcatctgagtcttcggaggaagagcgcagaaga
aaacacaaaaaaaagcaaagaaaaaaaagtaagaagcactacaagagagattcatcaagg
gagagggacaggaagaggaccagatcatcctcagaatcaagagaagaatcaagcttaggg
agttatcatcagagcataaaaagacataagagatccaggtcaagaatgagatcctcatca
gaagaatcagttccattcaacaaaaaggatgaaataaaggtgaagaaagaatacgaagaa
cgggaggcactaaagctgtcctccgattataacagaaaatctgaagttaaggatactgta
gctcagcgttgtggtgatgaagtccctggctcttcagtcaaacatgagaaaaataaaatt
acaagttcagattcagaggatgatctaatgtttgaatgggagcactatcgatatgagatt
aatcagatattctcaaatgacgacattatcaaaagaggaacaactgaatatgatgatttt
tggaaatttctgaaaaaataccaaggtctccaaaaacaaaaaacaataagacagatgtgt
ggaaataagcagtacagagaggaaacaggggcaggtgaagtaagtagtgtttacagagtt
cctcagcattttgataaaagatacaatatcaattttgctcttactgtaactactgatgat
tttcaaagaagacttcccattagagatttagatgaagataagccaagtctgtcaagaaag
agattaacagaactcaagttcattatattgctttatttagattttctgcagaaacagagg
tttgaaaagctgaaaaaattgagggaaacgcaggctaaccttccaatttcaaattataaa
gaggaaataatttcaaaagtttcatcaaacaatgttgtaattatagctggtgacacaggt
tgtggtaagtctacccaagtgccacaatatctgcttgcagcaggttattctaacattgca
tgcactcagccacgtcgtatagcatgcatatcattgtcaaagcgtgtagcatatgaaaca
ttaaatgagtttggctcaaaggttggttatcagataagatttgaaaagaataagacggaa
catacaaaaatagtttttttgacagagggacttcttctcagacaagtggccagtgatcca
ctgctctcaatgtatgatgtaatgattcttgatgagattcatgaaaggcatcttcataca
gactttctcttgggtgttatcaaatgccttgtaatgcagcgagaagacataaaggttgtt
ctaatgtcagctacaataaaccttgatctctttaggaattacttcatggggaaggctcct
gttgtccaagttccgggtagactttatcccatcaaactgcagtactttcctatccccgtg
attgagcaggcaagtaagagtgagaagctgaatccagcaccttatgtaagaattttacag
ctcattgacaagaagtatccagatgatgaacgaggtgatttgctgattttcctcagtggc
atgagtgaaatatcaacagttgttgaagctgttaagctttatggtcagcagactggtaaa
tggattgtgctacctttacacagtactctgtcagtatcagaacaagaaaaggtgtttgat
gtgcctccagaaggaattagaaagtgtattgtctccaccaatattgctgagacctctgta
acaatagatggtgtacgatttgttattgattctggcaaagttaaagaaatgagttttgat
gcacagtcaaaaatgagaaagttaaaggaattttggataagtcaggcctctgctgaacag
agaaaaggtcgagcaggtagaacaggaccgggcacttgtttccgactgtacacagaccaa
gagtattctcagttctcccaatacagtaccccagagatccagcgtgtcccgctagactca
ttggtcttgcagatgatatccatgggcctccccaatgttcggctcttcccattcattgag
cctcctgcccaagaacagttggagaatgcagttcagtcactgaaagctcatgctgccatc
accgaagctgaaggagtaacgactattggaaaccttctctcacagcttcccatggacatc
agccttgggaagatgctgataatgggatctcttttccatcaggtcgaaccagttctctct
ctggctgcagcaatgagcgtgcagagtcccttcaccaaccgagctcgcagggatcctgat
tgtgaggcctttatcaaaactcttcagtcagaccatggtgaccctttcactcttctggcc
ttatacagagaatggctgtacatcaagcagaatggacacgagaattcaagaaaatggtgc
aagagacgagggttggaagaacagagattctacgaaatgacaaagttacgccatcagttt
ttacagcttctacaagagtcaggcttacaagaagttgctggttgtgctcgtgccccattg
acaagtgctgaaagagctcagagaagtggtcacttgcgtcagcttcacgatcttaaaaga
gagttgtacaaagatggcccgaggaaggtgaaagtactgaaagtgtctcatggggaagaa
gttgttagtgatgaagaagataaccgaacagacataaaagatgttgatttcaggatcaaa
aatgaccagaagcgactctctgagatttaccgaagttgcaaaatacatacactgaaggat
attatcatgatgaaaattataatatgtagtggactctatcccaatgtagcaattgcagat
gaacataataattataagcctgggagtgaacagctatttcacacctttgcaaagcccttt
actgttctgcatccaaacagtgttttttctagccagccggaagttctccagattgctgat
tctgatataattgaatatcctggatttagtctacgaaatcctctatgctcaaagcaccag
tttttagtgtatgtttctttgttggagacaaacaaaccctatctagttgattcagtgcga
gttccttcagctcaggtggtgttgttatttgcacaaagcattgatacaaatgcagatatg
actgttatagcttttgataatttcattgaattaaaatttccagatgcaatgtctgctcag
aatcttcttttccaagctgttcagttacgtactaagtggaaatatttgttggacttgaga
atacagatttctaaaccttcaattgacaatcgggatcggttgattactgatgctaataaa
ctagaaaaggacctttctgttggattaattgatttcttcttaactgatgcactatatgca
aagagaagacttcttgctgcagatctagcagtgctccatgtgggacctgggtcaggagac
tgtatcttgagtgggaatccatttagtaaggatgcaagtgaaccatgccaagcaaacaat
accaagggtggggtggatctcacagaatacctcacttacaacagcctctttgatacagaa
tgtagtgtcaccaccatcacttcttatgatacagtctgtccttactgtgacaaggaattg
catgttacaactttagggcgtttgtcacacatgtcactttgcttggagggcttactccag
tcttctgaaaatgtggacgcggaagaagaaaacaaaggtgatgatccaacgaagaagaaa
ttctattgcgaagtttgccaacacaccctgtggttaggtattaaggacattttcaaacac
aagaaaatttgtaaatag
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