Penaeus monodon (black tiger shrimp): 119576118
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Entry
119576118 CDS
T08784
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119576118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119576118
Spliceosome [BR:
pmoo03041
]
Common components
Common spliceosomal components
SR proteins
119576118
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
SET_assoc
SPOR
Motif
Other DBs
NCBI-GeneID:
119576118
NCBI-ProteinID:
XP_037779602
LinkDB
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Position
8:complement(8675928..8693780)
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AA seq
382 aa
AA seq
DB search
MARVYVGGLHYNCRERDLERFFKRYGRLRDCLIKNGYGFVEFEDERDADDAVYEMNGREL
LGERVTVEHARGLPRRGGYGFGGGGGGRDRDRDRRPAWLDRASWSKPSDLHRRYGPPTRT
PYRVIVENLSSRISWQDLKDYMRKAGEITFADAHKHRRYEGVVEFATRSDMKRAIEKLDD
TELNGRRIRLIEDRQHSRSRSRSRRRSRSRSRSRRSYSRSRSRGRSRSRSRSRRSRTKSR
SRSRSKDSRSRSRSRSRSRSPRSRSRSKSRSRSRSKSVERKRSRSGGRDSRSRSGSRKMS
EEPLDKPKEMETARSRSRSHSRSRSRSRSPIDNKKETSRSRSRSRSRSRSRSPSASPRRR
DSRSGSRSRSPQENGHDHPEDE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggtgtatgttggaggtttgcactataactgccgtgaaagagacctggaaagg
tttttcaagaggtatggcagacttcgtgattgccttatcaaaaatggatatggctttgtg
gagtttgaggatgagagagatgcagatgatgctgtctatgaaatgaatggaagagaattg
ttaggagaaagggtgactgtagaacatgcccgtggacttccaagaaggggtggttatgga
tttggtggtggtggtggcggtcgagatcgtgaccgagatcgtcgaccagcttggcttgac
agagcgagttggagtaagccaagtgaccttcaccgcaggtacggccccccaacgaggaca
ccttacagggtcattgttgaaaatctgtcatctcgcatcagctggcaggatctcaaggat
tacatgcgcaaagcaggagaaattacctttgcagatgcccacaagcaccgtcgctatgaa
ggtgttgtagagtttgccacccggtctgacatgaagagggccattgagaagttagacgat
actgaactgaatggaaggcgaattaggctgattgaggatcgacaacactcccgttcccgc
tcaagatctcgcaggcgatctcgttcacgttcacgatcccgcaggtcatattcaaggtca
agatcaagaggtaggagtcgttctcgttcaaggtcaaggagatcaagaactaagtcacga
tcaaggtccaggtctaaggattctcgctcacggtcacgttcccgatcccgttcaaggtcc
cctcgatcacgttcgaggtcaaaatcgcgatctaggtccaggtcaaagtctgtagaaaga
aagaggtcaagatcaggtggaagagatagccgttcacgatcaggctccagaaagatgtca
gaagagccattagataagcctaaggaaatggagacagctcgttctcgcagcagatcccat
agtagatcacgatctagatctcgcagcccaatagataacaagaaagaaacttctcgatct
cgctcacggtcacggtcaaggtcacgatcacgatcaccctctgcttcaccacgtagacgt
gacagtcgctctggatctcgttcaaggtcaccccaggaaaatggacatgaccatcctgag
gatgaataa
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