Penaeus monodon (black tiger shrimp): 119576290
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Entry
119576290 CDS
T08784
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoo04131
]
119576290
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoo04147
]
119576290
Membrane trafficking [BR:
pmoo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119576290
Exosome [BR:
pmoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119576290
Exosomal proteins of bladder cancer cells
119576290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
TPR_COPA_B
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_Aladin
NBCH_WD40
TPR_Edg1
Motif
Other DBs
NCBI-GeneID:
119576290
NCBI-ProteinID:
XP_037779820
LinkDB
All DBs
Position
8:28584878..28642758
Genome browser
AA seq
1228 aa
AA seq
DB search
MLTKFETKSARVKGLSFHSKRPWVLASLHSGIIQLWDYRMCTLVDKFDEHEGPVRAVCFH
QQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTEFHQEYPWILSASDDQTIRIW
NWQSRSCVSILTGHNHYVMCARFHPTQDLIVSASLDSSVRVWDISGIPGKPGGLRKKNVS
PGMGGLTGSDDHHTRNPELFSAGDATVRHVLEGHDRGVNWAAFHPTLPLVISGSDDRQVK
LWRMNDSKAWEVDTCRGHYNNVSCVMFHPRQELILSNSEDKSIRVWDMAKRICLHTFRRE
HDRFWVLAAHPTLNLFAAGHDSGMIIFKLERERPAYALYGNLLYYVKERFLRRLDLTKNK
DVAVMQLRPGSRAPVYSMSFNPAENAVLLTTRTHNMDNSNYDLYQIPKETDSQNPDSPDS
KRSAGLTAVWVARNRFAVMDKSHQVVIKNMQNEVMKKVATPPCDELFYAGTGMLLLRDND
GVSLFDVQQKRVLGTARISKCRYVVWAANMTSVALLSKHTILICNRKLERLCSITETNRV
KSGSWDDSGVFVYTTSNHIKYALTNGDHGIIRTLELPVYVTRVAGNSVYCLDRQATPRIL
TIDSTEYRFKLALVQRKYDEVLQMVRGAKLVGQSIIAYLQKKGYPEVALHFVKDERTRFL
LALECGNIDVALDAAKALDDKGCWEKLAEHALLHGNHPVVEYCYQQTKNYDKLSFLYLIT
GNLAKLRRMMKINEIRKDYEGWYANALYLGDVPERIRVLKACGKTSLALLTAVTHGYAQE
AESLAAHVENGAIPEPLPSAQLLQPAPPVQPMDTAWPLLTVAKGFFDTAVAGGKAAGGAA
AAAMVVDDAGDIAGDGWGDDDDENVEDADLAVEGGDAEGGGWEVDDDLDLPPELEGSVSA
GTGGSGEDGFFIPPPRGHPPTHGWTQRSQLAIDHVLAGAFESATRLLHDQVGVVNFEPYR
QLFLSSYAHSRSSYTGAPAMPSLFAYPARNWRTAQNKDQLPALGLKLSNLMDRLKEASQL
TTAAKFSEALDKLRWILLAVPLIVVDTKQEITEAQNLLRVCKEYVVGISMELYRKGLGKS
SPEEQQRSLELAAYFTHCELQPGHQILTLRTAVNLAFKMKNYKMAMSFGRRLLNLGPRPE
VAQNIRKVVQACEKNPVDEMSIQYDEHNPFTVCASSYVPIYRGKPEVQCPLCSASYLPEH
KGITCKICDVAQVGKDSIGLRISPLQFR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaaatttgaaacaaaaagtgcgagagtcaagggactctctttccactcaaag
cggccatgggttcttgccagtcttcacagtggaatcatccagttatgggattatcgtatg
tgcaccttagtggataagtttgatgaacatgagggtccagttcgagctgtgtgcttccac
caacagcagccgctgtttgtgtctggaggagatgattataagatcaaggtgtggaattat
aaactgcgtagatgcctctttacactgcttggtcacttggattacatccgtactacagag
ttccatcaggaatacccctggatcctctcagcctctgatgaccagaccatacgaatttgg
aactggcagagccgctcatgcgtgtctatcctgacaggacacaatcactatgtgatgtgt
gcccgtttccatccaacccaagacctgattgtgtctgcttcactggactcttctgtccgt
gtctgggatatctcaggtattcccggcaaacctggaggccttcgcaagaagaatgtctcc
cctggaatgggaggccttacggggagtgatgaccaccacaccaggaatcctgagctcttt
agtgctggagatgccactgtgcgccacgtgctggagggccatgaccgtggagtcaactgg
gcagcattccatccaactcttcctctggttatttctggatctgatgacagacaggtcaag
ctgtggaggatgaatgattcaaaggcctgggaggttgacacttgccgtggtcactacaac
aatgtgtcctgcgtaatgttccatccaaggcaagagttgatcttgtctaattcagaggac
aaatccatccgtgtgtgggacatggccaagagaatctgcctccacactttccgccgggaa
catgatcgcttttgggtcctagcggcccatccaaccctcaacttgtttgcagctggccat
gacagtggcatgatcattttcaagcttgagagagagagaccagcctatgctctctatggc
aacctcttgtattatgtcaaggagaggttcctccgacgacttgatttaacaaagaataag
gatgtggctgtcatgcagttgcgtcctggatcccgtgcacctgtatacagtatgtccttc
aacccagctgagaatgctgtactccttacaacacgtacccacaatatggacaacagcaac
tatgacttgtatcaaatccctaaggaaacagactcccagaacccagattctcctgactca
aagaggtcagctggactcacagctgtttgggttgcaagaaatcgctttgcggtaatggat
aagagtcaccaggttgtgattaagaatatgcagaatgaggtcatgaaaaaggttgctaca
cctccttgtgatgagctcttctatgctggaacagggatgctcctcctgcgggataatgat
ggggtttctctctttgatgtccagcagaaaagagtccttggaacagccagaatttccaaa
tgcagatatgttgtatgggctgcaaacatgactagtgttgctctactctctaagcatact
attctcatctgcaaccgcaagttggagaggctttgctccatcactgagactaacagggtc
aagtcaggctcctgggatgatagtggtgtgtttgtgtacaccacaagcaatcacatcaag
tatgcacttaccaatggagaccatggaatcatacgtactctggaactgcctgtctatgtt
accagggtggcaggcaattcagtttattgccttgaccgtcaagcaactccaaggattctg
accatcgattcaactgaatatagattcaagctggccttggtccagcgtaaatatgatgaa
gtgctgcaaatggtaagaggtgccaagctggttggacagtccatcattgcctacctgcag
aagaagggttacccagaagtggctctccatttcgtgaaggatgaaagaacccgattcctt
cttgcacttgagtgtggcaacattgatgttgctcttgatgctgctaaagctcttgatgac
aaagggtgctgggaaaaactggctgaacatgctctccttcatggaaatcatcctgtggtt
gagtattgctatcagcagaccaaaaactatgataagctgtcattcctgtacttgatcact
ggaaacttggctaagttgcgccgcatgatgaagatcaatgaaattcgcaaggattatgag
ggttggtatgccaatgcactctacttgggtgatgtcccagaacgcataagggttcttaaa
gcatgtggcaaaacatctttagctctgctgacagcagtcacacatggctatgcacaggaa
gcagagtctctggctgcccatgttgagaatggagctattccagaacctcttccaagtgct
cagctgttacaaccagcacctcctgtgcagcctatggacacagcttggcctctcttgact
gttgcaaagggcttctttgatactgctgttgctggaggcaaagcagctggaggagctgca
gcagctgccatggtggtagatgatgctggggacattgctggtgatggatggggagatgat
gatgatgagaatgttgaagatgctgatttggctgtagaaggtggagatgctgaaggaggt
ggatgggaggtggatgatgacctggacctgccaccagaacttgagggatctgtttcagct
ggcactggtggatctggtgaggatggcttcttcatccctccaccccgtggacacccacca
acccatgggtggacacagcgaagtcagttggcaattgatcatgtcttggctggagctttt
gagtcggctactcgattacttcatgatcaggtgggagttgtgaacttcgaaccataccgg
cagctgttcctctcatcttatgcccattcccgctcaagctacactggtgctcctgcgatg
ccatctctctttgcatacccagctcgtaattggcgaactgcacaaaacaaggatcaatta
cctgctctgggattaaagctttcaaatctaatggatagacttaaggaagcatctcagttg
acaacagcagccaaattttcagaggctctggataaactgcgctggattctacttgctgtt
cctctcattgttgtggatacaaaacaagagattacagaagcacagaatctgctaagagtg
tgcaaggagtacgttgttggtatcagcatggagttgtatcgaaaaggtttgggtaagagt
agtccagaagaacaacagcgctcccttgaattggctgcgtacttcacacattgtgaacta
caacctggacaccagattctgacactgagaactgcagtgaatttggcctttaagatgaag
aattacaagatggccatgagctttggtcgtcgtctattaaatcttggacccagaccagaa
gtggctcagaatataaggaaggttgttcaggcatgcgagaagaacccagttgatgagatg
tcgattcaatatgatgagcataacccattcactgtatgtgcaagttcatatgtacccatt
taccgtggaaagccggaagttcaatgtccattgtgtagtgcatcatatctgccagagcac
aagggcattacttgcaaaatttgtgatgttgcacaagttggcaaggattccattgggctt
cgcatatcaccactacagttccggtaa
DBGET
integrated database retrieval system
