KEGG   Penaeus monodon (black tiger shrimp): 119576569
Entry
119576569         CDS       T08784                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119576569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmoo03041]
    119576569
   03036 Chromosome and associated proteins [BR:pmoo03036]
    119576569
Spliceosome [BR:pmoo03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119576569
 Complex B
    119576569
 Complex C
   U2 SnRNP specific factors
    119576569
Chromosome and associated proteins [BR:pmoo03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    119576569
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT HEAT_ECM29 XMAP215_CLASP_TOG DUF2298
Other DBs
NCBI-GeneID: 119576569
NCBI-ProteinID: XP_037780171
LinkDB
Position
1:complement(34149049..34152535)
AA seq 1152 aa
MVDKDHDPMAQYKRPTIADREDNYRARRQMQVISPERNDPFADGGKTPDMNARTYAHIMQ
ETRLKGEEALIRKTIQERAKEGTLQAVATNGDAPKAAPRKRGRWDQTADETPQPKKKTTW
EAETPSVARWDETPGRAKGSETPGATPGQSTRMWDATPGHATPGHETPVHDKATPSARRN
RWDETPKTDRGETPGHNSGWAETPRTDRGASDLIQETPTPSASKRRSRWDETPAAQTPGA
TPSGAMNPINTPTTPVXTPGNGWTPGGITPGGTTPVGPKAIGMATPSPGQLVNMTPEQIH
AFRWEREIDERNRPMTDEELDALFPPGYEVLPPPQGYVPIRTPARKLTATPTPMIGTPQG
FYMQKEGMTPKHDDSQPKGNLPLLKPEDAQYFDKLLQDVDEESRLKPRRKKEGKKIMKLL
LKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLY
KLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNID
EYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILP
HLRSLVEIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWRGIRQHRGK
GLAAFLKAIGYLIPLMDGEYADYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGV
EPGYIKEEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIVNRIVDDFLKKD
XKRXSSXPXKWWMEKLKKKKFMANLEQQDIAFPRGLEEPVKFDGKFFYAFQEQTTEDVVM
LNGFGTIVNALGSRVKAYLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKK
TDWGNIFWKYIPEVLGVPFLGCFXKVICECLLGMHKMKKPSPIKKILLPTSITPILKNRH
EKKVQENCIDLVGRIADRGPEYVSPREWMRICFELLELLKAHKKAIRRATVNTFGYIAKA
IGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPGLMNEYRVPELNVQNGV
LKSLSFLFEYIGEMGKDYIYAVTSLLEDALMDRDLVHRQTACAAIKHMAIGVWFWLRRLH
WISLCLKYVYGA
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggttgataaagatcatgaccctatggcacagtacaagcgacccacaatagcagataga
gaggataattatcgtgctcgtcgtcaaatgcaagtcatttccccagaaaggaatgatcct
tttgctgatggaggcaaaacacctgacatgaatgcgcgaacctatgcacacatcatgcag
gaaacacgtctgaaaggagaagaagcccttatccggaaaacaattcaggaaagagcaaag
gaaggaactcttcaagctgtggcaaccaatggtgatgcacctaaagctgctccaagaaag
cggggccgttgggatcagacagctgatgaaacgccacaaccaaagaaaaagacaacatgg
gaagctgaaactccttctgttgctcgttgggatgagactccaggtcgagccaaaggaagt
gagacacctggtgcaacaccaggacagagtactcgtatgtgggatgccacaccaggtcat
gcaacacctggccatgaaacaccagttcatgacaaggctactccttcagctcgacggaat
cgatgggatgagacaccaaaaacggatcgtggagaaactcctggacataacagtggctgg
gctgaaacccctcgaactgaccgtggagctagtgacctcatacaagaaaccccaactcca
agtgccagcaagcggcgctcaagatgggatgaaactcctgctgcacaaactcctggtgcc
actccatcaggagctatgaaccccatcaacacccccaccacaccagtatgaactccagga
aatggatggactcctgggggtataactcctggaggtacaacacctgtagggccaaaggct
attggcatggctactccatcaccaggacagctggtaaatatgacaccagaacaaattcat
gctttcaggtgggagagggaaattgatgagaggaatagacccatgacagatgaagaactt
gatgctttatttcctcctgggtatgaggtgctaccaccacctcagggttatgttcctata
agaacacctgcgcgtaaattaacagctactccaacaccaatgataggaacccctcaagga
ttctacatgcagaaggaggggatgacacctaagcatgatgactcacagccgaaaggtaat
ttgcccctactgaaacctgaagatgcccagtacttcgataaacttctgcaagatgttgac
gaggagagccgcctaaagccaagaagaaaaaaggaaggaaaaaaaataatgaaattactt
ctcaaaataaagaatggaactcctccaatgcgcaaggcagcactacgccagattacagat
aaagcaagagagtttggtgcagggcctctctttaaccagattcttccgttgcttatgtcc
ccaacactggaggatcaagaacgacatcttttggtcaaagttattgacagagttctgtac
aaacttgatgacctggtacgcccttatgttcataaaattcttgtggtcattgaacctcta
cttattgatgaagattactatgctcgtgtagaaggtcgagagatcattagtaatttggcc
aaagctgctggattagcaaccatgatttccacaatgagacctgatattgataacattgat
gaatatgtgcgtaacactactgcccgagcctttgctgttgtggcctctgcccttgggatt
ccatctttgctaccatttttaaaggctgtctgtaagagcaaaaagtcatggcaggcacgg
catactggtattaagattgtacagcagattgccatcttgatgggttgtgcaattttgcca
catctccgttcccttgttgaaattattgaacatggacttgttgatgagcaacagaaggtg
agaactatcactgcccttgccttggctgctctggcagaagcagcaacgccttatggtatt
gagagttttgattctgttttgaagcctctgtggcgtggtatccgacaacaccgtggcaag
ggtcttgctgcctttttgaaagctattggttatctgatcccacttatggatggagaatat
gctgactactatacaagggaagtgatgttgatcctcattcgtgaattccaaagtcccgat
gaagaaatgaaaaagattgtgttgaaggtggtcaaacagtgttgcgccacggatggtgtt
gaaccaggatatattaaggaggagatcctgccccacttcttcaaacacttttggaaccac
agaatggctctcgatcgtcgtaattaccgccagctagtcgatacaactgttgagattgca
aataaagttggagcatctgagattgttaaccgtattgtagatgattttttaaaaaaggat
tgaaaaagatgaagcagttaaccgtaaaaatggtggatggaaaaactgaaaaaaaagaaa
ttcatggctaaccttgagcagcaagacattgcatttcctcggggactcgaagaaccagtt
aaatttgacggtaaattcttttatgcattccaggagcagactacagaagatgttgtcatg
ctcaatggatttggtaccatagtcaatgctcttggatcacgtgtcaaggcttaccttcct
caaatttgtggtactatattgtggcgcctgaataataagtcagccaaagtgcgtcaacaa
gctgcagatctgatatctcgcattgcagttgtaatgaaaacatgccaggaagagaaaaaa
actgattgggggaacattttttggaaatatatcccggaagttcttggggtcccatttctt
ggttgcttttgaaaggttatttgtgaatgtttattgggaatgcacaaaatgaaaaaaccc
tcccccatcaaaaagattcttctccccacgtccattactcccattctgaagaacagacat
gaaaaaaaagtacaagaaaattgcattgacttggtaggacgcattgctgacagaggacca
gagtatgtgagtcctcgtgaatggatgagaatttgctttgaattgttagaacttcttaaa
gcacataaaaaagccatcagaagagcaacagtaaacacatttggttatattgccaaagcc
attggtccacacgatgtgcttgctacattactaaataaccttaaggttcaagagcgacaa
aatagagtgtgtacaactgtggctattgctatagttgctgaaacatgttccccatttaca
gttctcccaggtcttatgaatgaatacagagttccagaacttaatgtccaaaatggagtt
cttaagtccctatctttcctttttgaatacataggtgaaatggggaaagattatatatat
gctgtcacatcacttctggaagatgctctcatggacagagatctagtacacaggcagact
gcatgtgcagccatcaaacatatggccattggagtttggttttggttgcgaagattgcac
tggatttcactttgtttgaaatatgtttatggggcctaa

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