Penaeus monodon (black tiger shrimp): 119577203
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Entry
119577203 CDS
T08784
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119577203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119577203
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119577203
mRNA cycle factors
Common to processing body (P body) and stress granule
119577203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
119577203
NCBI-ProteinID:
XP_037780860
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All DBs
Position
9:complement(44779952..44801533)
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AA seq
955 aa
AA seq
DB search
MKTASQLLREAEGLKSRVNGCTQLVGNNEAWAIQHQLQVVCGQLLVHWIESALDHGVERD
LWNLGFRNTITQLQAQAKDKQGGASEARDLLGWFLNSASGFYLQLFNQICTEYGLDLPFR
RKDSIYGSIELSGSPQEKCKGSSLKNALYLCQYCLVHLGDLARYRHQAKQAETYYRHAVV
VAPTSGHPYNQLALLEAGRGNRLAAVALYVRAMCVPCPFPGAPANLTQTLSKLLASSSRD
LSGSCRVTSDEYTSLFLQCHALLYLSGDVNSARKALPTLCSGLSTLVATSAFTRTSLIQM
VLVNLFALNYFSGNVKVRTSDEAGLRKDEEKQENPKDPKELEGCLHVVEELTVGILAALL
LPVHTIRDPDQLMTYPALPAIRLLFEWVRCEGGVFMSEAMKGKQQIWPGLCTLVNNLQQP
LASFSASKYSEVPLAEDWDLQGFEPLQKMLSKYKYREGLSKPSPEEYNCIRAFRLTEVAK
WFAEQNIDGNSVIKIREGSEDAVGGLVFEPMQHTSPPVDEVRALEQLSLQPKPEEKSSNK
RGKVGILKPQGSLERARETREQQQEPDKAENPLSQAMVDPMESKELGGGGLIIKVVSGAT
QSQNPLTGQPQSLPGQGQGQGQGQGQGQGQTQVRPSRTRTNVALQAIMKRNSALQEAKQV
TFKTPSPAISPNPSEASSDSHRSQLSTPPLLPATTQRDPLTSSPMPHHLAHMYQMGSNQG
PAPPPFTQHNQITESSFPNQQFTGQPPWVGVPGMGGSAPPPQVNMGRPIHQQNLPLNSGP
GFNMTHNGNSKSPQEVLRQLQTNAPSQSDLLTAGVFNRPPIEGFHQLGGSMPRRPGDMGS
RMREPAPRMLEMMGMARAPPSFGPVEGGGNPNRFHPPGSESQGFDSSPRMTQAPPFRMQD
VDKTTTPSQNQSPESCTTLSRNHESSPVWDGLTSEHRRNRGNRGIRWVEECLWGD
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgccagtcagcttctaagggaggctgagggtctgaagagtcgtgtcaatggg
tgtacccagttagtgggcaataatgaagcctgggctatccaacaccaactgcaggtggtt
tgtggacaactccttgtacactggattgaatcggccttggaccatggagtggagcgtgat
ctgtggaaccttggcttcaggaacaccataactcagctgcaggctcaagctaaggacaag
cagggaggagcaagtgaagcccgtgatcttctgggttggttcctcaactctgcaagtggc
ttctatttgcaactttttaatcaaatatgtacagaatatggactggacttgcctttccgg
aggaaagacagtatctacggctccatcgaacttagtggctcccctcaagagaagtgtaaa
ggtagtagcctcaagaatgccttgtatttgtgccagtattgcctggtgcacctgggggac
ttggccaggtatcggcaccaagctaagcaggctgagacctattatagacatgccgttgtg
gttgctcccaccagtggtcacccatataatcagttggctttattagaagctggcagaggg
aaccgtcttgctgccgtggctctctatgtcagggccatgtgtgtgccttgtccctttcct
ggtgcacctgccaacctcacacagacattgtccaaattgcttgccagcagcagccgtgac
ctgagtggttcttgccgcgtgacaagcgatgagtacacgagtctgttcctccagtgccat
gccctgctgtacctcagtggtgatgtgaacagtgcacgaaaggctctccccactttatgc
tcgggcctgtccaccttggtagctacaagtgctttcacaagaactagtctgatccagatg
gtcttagtgaacctgtttgccctgaattacttctcggggaatgtgaaggtgaggaccagc
gatgaggcaggactcaggaaggacgaagagaaacaggagaatcccaaagatccaaaggag
ttggaaggttgtctgcatgttgttgaggagttgacagtgggaatcctagctgcgcttctg
ttgcctgtccacaccatccgagacccagatcagctgatgacttacccagcgcttcctgca
atccgtcttttgtttgagtgggtgaggtgcgagggaggagtgttcatgtcagaggccatg
aaggggaagcagcagatctggccaggactctgcaccttagtcaacaatcttcagcaacct
ctagcttccttcagtgccagtaaatattcagaagtgccgctggcggaggattgggacttg
caaggcttcgaaccactgcagaagatgctcagtaaatataagtatagagaagggctctcc
aagccaagtccagaagagtacaactgcatccgagcctttagactgacggaagtagcaaag
tggtttgctgaacagaacattgacgggaactcagtcatcaagattcgtgaaggaagtgaa
gatgcagtgggagggttggtgtttgagccgatgcagcacacaagtcccccagttgatgaa
gtacgagccctagaacaactctccctccagccaaagcctgaggaaaagtcatctaataag
cgaggtaaagtggggatcctgaagccacagggatccttggaacgagccagagagactcga
gagcagcagcaggaacctgacaaagcagagaatccgttgtctcaggctatggttgatcct
atggagtccaaagaactaggtggtggtgggttgatcatcaaggtggtctcaggagcaact
cagtcacaaaatccactcacaggtcagccccagtcgctgccaggtcaaggccaggggcag
ggccaggggcaggggcaggggcaaggccagacccaggtgcgcccctcacgcacacgcact
aatgtggcactgcaggccatcatgaagaggaattcagctctgcaagaagcgaaacaggtc
actttcaagaccccatctcctgccatatctcccaacccttctgaagcttctagcgacagt
caccgcagccagctctcaactcctccattgctcccagccacaacacaacgggaccccttg
accagctcccccatgccacaccatcttgcacatatgtaccagatgggttccaaccaaggt
ccagcacccccacccttcactcagcataatcagatcacagagagcagttttcctaaccag
cagttcacaggacagcctccatgggtgggagtcccagggatgggtggaagcgcacctcca
ccccaggtaaatatgggtcgtccaatccaccagcagaacctgcctttgaactctggccca
ggcttcaacatgactcataatgggaatagcaagtctcctcaagaagtgttgcgacaattg
cagacaaatgcacccagccaatcagatttattaacagctggggtcttcaatagaccacca
attgagggcttccatcagctgggtggatccatgccaaggagaccaggtgacatgggcagt
agaatgcgggaacctgcaccaaggatgctagaaatgatgggtatggcaagagcacctcct
tcatttggtcctgtagagggaggggggaatcctaatagatttcacccgccaggaagcgaa
agccaaggatttgacagttccccccgaatgactcaagcaccaccattcagaatgcaagat
gtggacaagacaaccactccaagccaaaatcagtcacctgaatcatgcactactctctcc
aggaaccatgaatcctcacctgtttgggatggactcacgtcagaacataggaggaaccgg
gggaataggggtatcaggtgggtcgaggaatgtctttggggagactga
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