Penaeus monodon (black tiger shrimp): 119577210
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Entry
119577210 CDS
T08784
Name
(RefSeq) ATP-dependent RNA helicase HAS1-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119577210
03009 Ribosome biogenesis [BR:
pmoo03009
]
119577210
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119577210
Spliceosome [BR:
pmoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119577210
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
90S particles
Helicases
119577210
Pre-60S particles
119577210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Peptidase_M27_Wo
LPD26
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
119577210
NCBI-ProteinID:
XP_037780872
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All DBs
Position
9:47832898..47841645
Genome browser
AA seq
631 aa
AA seq
DB search
MGTKTKDKILMRKIKKTQTKKLKLIQEKEKEKEASGESATAVEEPLPEEEAERLIQLHPT
LSKRPAEEEEQRPKKKKKKQPLKDLEKALDDGADNEPEPEPEAKGKEEKSDTGKQRNEEA
EEEEEEEEEETRKELDSTLGFNATTTKSFESLEGCVSNETMNAIKTMGFKDMTEIQAKAI
PKLLEGLDLRGTAKTGAGKTLAFLIPAVELMYKLKFKPRNGTGVIIISPTRELSMQTYGV
LRELMQEHSQTFGLIMGGADRKSEGAKLRKGVNILVATPGRLLDHLTNTPDFMYKNMVCL
VIDEADRIFDVGFEQEMKQILNILPKRRQTMLFSATKDTKTDELARLALKTDPMEVDVDS
DKMNATVEGLEQAYLVCPADKRFLVLYTFIKKNLKKKVMIFFNSCMTVKYYHELLNYIDV
PVMCIHGKQKQVKRTNTFYQFTNADSGVLLCTDVAARGWDIPAVDWIVQYDPPDDPKEYI
HRVGRTARAGGRGRALLFIREEEYLFISYLKSHKVNVDCMDISWTKVANIQMQLEKLIGQ
NHFLHQSAKEAYRGYLRAYHSHQQKHIFDINTLDLKKVAKCFGFIVPPLIDLNIASGKLP
HKRGGGGGYGGINQRKDFKTKIYRQGNRPRY
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaaaacaaaagataagattttgatgcgaaagatcaagaagacgcagaccaaa
aagttaaagctgatccaggagaaggagaaggagaaggaagcgagtggagaatctgccaca
gcagttgaagagccattgcctgaggaggaggcagaaagactcattcagcttcatccaact
ctaagtaaacgtcctgcagaagaagaggaacagcggccaaagaaaaaaaagaagaaacag
cctctgaaagacctagaaaaagcccttgatgatggggctgataacgagccagagccagag
ccagaggcaaagggcaaagaagaaaaaagtgatacagggaaacagagaaatgaggaagca
gaagaggaggaggaggaggaggaggaggagaccagaaaggagcttgacagtacacttggc
ttcaatgccactaccaccaaatcatttgagagccttgagggttgcgtgtccaacgagaca
atgaatgccataaagacgatgggcttcaaggacatgacagagatccaggcaaaggcaatc
cccaaactcctggaaggccttgacctgcgtggaacagccaagaccggagcaggaaagaca
ctggcctttctcatccctgctgtagagttgatgtacaaattgaagttcaagcccagaaat
ggtaccggagtgatcatcatctctccaactcgtgaattgtccatgcaaacatatggtgtt
ttgagagaactcatgcaggaacattcgcaaacatttggcctgatcatgggaggtgcagac
cgcaagagtgaaggtgcaaagttgcggaaaggtgtgaatatcttggttgcaacacctgga
aggctcctagatcacctcactaacactccagacttcatgtacaaaaacatggtttgtctt
gtcattgatgaagctgaccggattttcgatgttggatttgagcaagagatgaaacagatc
ttgaatattctaccaaaacggaggcagacgatgctgtttagtgcaacaaaagatacaaaa
acagacgagcttgccagacttgccctaaagacagatcccatggaagtagatgtggattca
gacaaaatgaatgcaacagtagagggcctagaacaagcttatctggtgtgtcctgctgac
aagagattccttgttctctataccttcattaagaagaatctaaagaagaaagtcatgatc
ttcttcaattcgtgcatgactgtcaaatactaccatgagctactgaattacatagatgtc
cctgttatgtgcatccatggaaaacaaaagcaagtgaaacgaacgaataccttctaccag
ttcacaaatgcagattcaggtgtcttgttgtgcacagacgtagcagccagaggttgggac
attccagcagttgattggattgtgcagtatgatcccccagatgatcccaaggaatacatc
caccgtgttggaagaacagctcgtgctggaggcagaggtcgtgctctcctgttcatccgc
gaagaagaatacctgttcatcagttacctcaaatctcacaaggtcaatgtggattgcatg
gacatttcatggaccaaagtggcaaacattcagatgcagctggagaagctgattggccag
aaccacttcctacaccaaagtgctaaggaagcttacagaggatacctaagagcatatcac
tcacatcaacagaaacacatctttgacatcaacacactcgacttgaaaaaggtggccaag
tgctttggcttcattgtgccgcccctcatcgacctaaatatagcgtcgggaaaactaccc
cacaagcgtggtggtggtggaggctatggaggaatcaaccagaggaaagacttcaaaacg
aaaatataccgacaggggaatagacctagatattag
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