Penaeus monodon (black tiger shrimp): 119577720
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Entry
119577720 CDS
T08784
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119577720
09123 Folding, sorting and degradation
03018 RNA degradation
119577720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119577720
03041 Spliceosome [BR:
pmoo03041
]
119577720
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119577720
mRNA degradation factors
5'-3' decay
Lsm complex
119577720
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119577720
Complex C
U2 snRNP components
119577720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
119577720
NCBI-ProteinID:
XP_037781206
LinkDB
All DBs
Position
10:324555..326453
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLIGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDTEKYPHMLSVKNC
FIRGSVVRYVQLPVDEVDTQLLQDAARREAQQQRQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctactctttctttaaatccctgattgggaaggatgtagtggtagagctaaag
aatgatctcagcatctgtgggactcttcattcagtagaccagtatctaaacatcaaactc
acagacatcaacgtcacagatactgagaaatacccacacatgctgtctgtgaagaactgc
ttcatcagaggatcagtagtgcgctatgtgcaacttcctgtagatgaagtagacactcag
ctgctccaggatgcggcaaggagagaggcacagcaacaacggcagtaa
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